Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0195 ATGGAGATAACCTACGCATCGCCCAGTTTCTCCGACCTCCCCGCCGCCGCTTCCACCTCCATGCCATCGTCGGCGAGCGCCGCGCGTCCCGTCAGGATCATTCCCCTGCAGCACCCGACCGCTACGACGTCGCCGTCGCCGCCGCCGAACGTCGCGTTCGCGCGGTGGACGGCGAAGCTCCGACGAATGACGTGGCTCGAATGGATCGAGTTCTTCCTACCTTGCGTCCGTTGGATTCGCACCTACAAATGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCATATGCAAAATTGGCTGGACTTCAACCGATATATGGACTCTACTCTGGTTTTGTGCCCATATTTGTATATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTAGGCCCAGTGGCATTGGTTTCTCTCCTGGTCTCTAATGTGCTAAGTAGCATAGCTGATTCATCCAGTGAATTGTACACACAGCTGGCAATATTACTGTCTCTTATGGTTGGGATAATGGAGTGCATAATGGGACTCTTGAgGCTTGGATGGCTGATTCGTTTTATTAGCCATTCAGTGATTTCTGGCTTTACAACTGCTTCAGCTATTGTCATTGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGATATAGACAGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGCTGGAGCAGATAAGttttcatggCCCCCTTTTGTGATGGGATCCATTATGCTTGCGATACTGCTTGTCATGAAACACCTGGGAAAATCGAGGAAGTACTTGCGATTCTTGAGAGCTGCTGGCCCTCTTACAGCAGTAGTTCTGggaacaatttttgtaaaaatatttcatcCATCATCAATTTCTTTGGTGGGAGATATACCTCAAGGCCTACCAAAATTTTCTGTTCCAAAAGCTTTTGAGTATGCACAGTCCTTAATTCCAACTGCTCTTCTCATAACTGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTACGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTAAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGGATTGTTTCAGGAATTATAGTGACCTGTGCACTTTTGTTTCTAACACCATTATTTGAGTACATACCTCAGTGTGCCCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAGATTGGCGTCCTTATTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGAGAGTTCTAAAAGACATGGACCTGAAGttgaaagaatttattttgCGATTCTAGAGATGGCACCTGTGACCTATATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTATCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTATTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCGTGTTCAAAGCTTGAAAGCTGGATCTCACAGTTCACGATCAGAAGACAAACCAAGTTTCTTTGCGCGGTTATtgaaagagagaggagagaaccTTTCAATTACTGACTTGGAGTCTGGTAACGGCAGGCCTCCACTCCCCAGGAATAGAGATTCCCAGTTGGAGCCATTGTTGTCAAAAGAACATTAA 2100 0.4338 MEITYASPSFSDLPAAASTSMPSSASAARPVRIIPLQHPTATTSPSPPPNVAFARWTAKLRRMTWLEWIEFFLPCVRWIRTYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSSIADSSSELYTQLAILLSLMVGIMECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDRSSKIIPVVKSIIAGADKFSWPPFVMGSIMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTIFVKIFHPSSISLVGDIPQGLPKFSVPKAFEYAQSLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIVTCALLFLTPLFEYIPQCALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLIGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVDVESSKRHGPEVERIYFAILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQRVQSLKAGSHSSRSEDKPSFFARLLKERGENLSITDLESGNGRPPLPRNRDSQLEPLLSKEH 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0195 699 TIGRFAM sulP: sulfate permease 74 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu3g0195 699 CDD STAS_SulP_like_sulfate_transporter 512 628 - -
Ssu3g0195 699 Pfam STAS domain 512 631 IPR002645 -
Ssu3g0195 699 PANTHER SULFATE TRANSPORTER 44 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu3g0195 699 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Ssu3g0195 699 Gene3D STAS domain 491 639 IPR036513 -
Ssu3g0195 699 MobiDBLite consensus disorder prediction 669 699 - -
Ssu3g0195 699 ProSiteProfiles STAS domain profile. 511 635 IPR002645 -
Ssu3g0195 699 SUPERFAMILY SpoIIaa-like 513 635 IPR036513 -
Ssu3g0195 699 PANTHER SULFATE TRANSPORTER 4.1-RELATED 44 648 - -
Ssu3g0195 699 Pfam Sulfate permease family 88 461 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0195 Ssu-Chr3 3565661 3578380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0195 3 660 Inorganic Solute Cotransporters AT5G13550 73.013 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0195 K18059 - gmx:100794754 1222.99