Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0163 ATGATGTTTAGGATACTTATCCTATTTCAGGCTTTTATGGTGACAAATTCAATAGCTCTCACGGACCAACAAACATACATAGTACACATGGACAAGACCAAGATCAAAGCCTCAATTCATCCTCAAGACAGCTCAAAACCATGGTTTGAATCAATCATGGATTTCATTTCTGAAGCTTCAATgcaagaacaagaagaagaaggagaagaagagatTTTAGCTCCTCAACTCCTTTACACATATGAAACCAGCATGTTTGGTTTTGCTGCCCAGCTTTCCAAGAAACAccttaaaaaattgaaccaagTGGATGGTTTCCTCTCAGCCATACCTGATGAGCTATCAACCCTCCACACAACACACACCCCACACTTTCTTGGCCTAAGGAATGGAACAGCACTTTGGACTGCTTCTAACTTGGCCTCAGATGTGATTATTGGGGTTCTTGATACAGGAATATGGCCTGAACACATGAGTTTCCAGGACTCAGGCTTGTCCCCAGTACCTTCTCGTTGGAAAGGTGTTTGTGAACAAGGCACCAATTTCTCTGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAACCTATTTCAAGGGGTATGAAAAATCTAATGGAAAAATCTCTGAAAAAGAGGATTATCTTTCCCCAAGAGATTCCCGAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTGATATGGTGAGAAATGCCAACCTTTTTGGCCTGGCTAGAGGCACAGCAAGGGGAATGAGGTATACCTCAAGAATTGCAGCTTATAAAGTATGCTGGCCTTCGGGTTGTGCTAATTCTGACATATTAGCCGCCATGGACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGAGGTGATCCCACACCTTTTTACAATGATTTAATTGCCATAGCTTCATTTGGGGCAACCAAGAAAGGAGTTTTTGTTGCTTGCTCTGCAGGCAATGATGGCCCTTTTCCTTCAACAGTTGCAAATAGCGCCCCATGGATCATGACAGTTGCTGCTAGCTCCACTGACCGAACCTTTCTAACAGAAGTAAAGCTTGGGAatggaaaattttttaaagggTCATCTTTATATCATGGCAATCAAACAAAGCTATTGCCCGTTGTCTATGGCAGGTCAGCAGGTACCGAAGAGGAAGCAGAGTTTTGCATCAGCGGCTCCCTTGATTCAAAGCTTGTGCATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAAAAGGGAGAGGTAGTGAAAGTGGCAGGTGGGGCAGGAATGATACTACTTAACTCTGAAAGTCAAGGAGAAGAACTTTTTGCTGACCCTCATATTTTGCCAGCCACTTCCTTAGGGGCTTCAGCAAGTAAGACTATTAGAAGCTATATTCAGTCTGTTAAAAAACCAATAGCTTCAATTTCCTTCATGGGGACAAGGTATGGTGACCCTGCACCAGTAATGGCAGCATTTTCTTCTAGAGGACCAAGTATAGTGGGACCAGATGTGATTAAGCCAGATGTTACTGCACCTGGTCTGAACATCTTGGCTGCTTGGCCAACCAAAACTAGTCTAAGTTCTCTCCCGAGTGACAAAAGAAGAGCACTATTTAACATACTTTCAGGTACCTCAATGTCTTGCCCTCATGTTAGTGGCATAGCAGCACTGCTTAAGTCTTTGCACAAAGATTGGTCCCCTGCAGCTATCAAATCTGCTCTGATGACTACTGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCCTCAAATAACTCATCATTTGCTAACCCCTTTGCATTTGGTTCAGGCCATGTTAACGCTGTAAGTGCTTCTGATCCAGGGTTAGTGTATGATATCAGCACCCAAGactacttaaattatttttgcagtATAAACTATACCTCTTCCCAGATTGCTTTATTATCAAGAGGTAACTTTGTATGTTCTAAAAAAGCAGTTCTTCAAGCTGGAGACTTGAACTACCCTTCATTTGTTGTTCTATTTAGCAGAAGTGCCTTAAATGCTAGTGTGACATACAAGAGGGTTGTCACAAATGTTGGAAAACCCCAAAGTGCTTATGCAGTTAAAGTGGGACAGCCAAATGGAGTTTCAGTTACTGTTGCACCAAGGATATTGAAGTTTGAAAAACTGGGTCAGAAATTGAGCTACAAGGTGACATTTTTGGCAATTGGAAGAGCAAGAGTTCCAGGTACCTCATCATTTGGATCACTGATTTGGGCATCTGGCAGATATAGAGTTAGAAGTCCTATAGCAGTAACCTGGCAAGAATGA 2319 0.4118 MMFRILILFQAFMVTNSIALTDQQTYIVHMDKTKIKASIHPQDSSKPWFESIMDFISEASMQEQEEEGEEEILAPQLLYTYETSMFGFAAQLSKKHLKKLNQVDGFLSAIPDELSTLHTTHTPHFLGLRNGTALWTASNLASDVIIGVLDTGIWPEHMSFQDSGLSPVPSRWKGVCEQGTNFSASNCNKKLIGARTYFKGYEKSNGKISEKEDYLSPRDSRGHGTHTASTAAGDMVRNANLFGLARGTARGMRYTSRIAAYKVCWPSGCANSDILAAMDQAVSDGVDVLSLSLGGDPTPFYNDLIAIASFGATKKGVFVACSAGNDGPFPSTVANSAPWIMTVAASSTDRTFLTEVKLGNGKFFKGSSLYHGNQTKLLPVVYGRSAGTEEEAEFCISGSLDSKLVHGKIVACERGINGRTEKGEVVKVAGGAGMILLNSESQGEELFADPHILPATSLGASASKTIRSYIQSVKKPIASISFMGTRYGDPAPVMAAFSSRGPSIVGPDVIKPDVTAPGLNILAAWPTKTSLSSLPSDKRRALFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDMASNNSSFANPFAFGSGHVNAVSASDPGLVYDISTQDYLNYFCSINYTSSQIALLSRGNFVCSKKAVLQAGDLNYPSFVVLFSRSALNASVTYKRVVTNVGKPQSAYAVKVGQPNGVSVTVAPRILKFEKLGQKLSYKVTFLAIGRARVPGTSSFGSLIWASGRYRVRSPIAVTWQE 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0163 772 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 146 157 IPR023827 -
Ssu3g0163 772 SUPERFAMILY Subtilisin-like 117 624 IPR036852 GO:0004252|GO:0006508
Ssu3g0163 772 MobiDBLite consensus disorder prediction 209 230 - -
Ssu3g0163 772 Pfam Subtilase family 142 591 IPR000209 GO:0006508|GO:0008236
Ssu3g0163 772 Pfam Peptidase inhibitor I9 25 115 IPR010259 -
Ssu3g0163 772 Gene3D Peptidase S8/S53 domain 143 633 IPR036852 GO:0004252|GO:0006508
Ssu3g0163 772 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Ssu3g0163 772 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Ssu3g0163 772 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Ssu3g0163 772 ProSiteProfiles Serine proteases, subtilase domain profile. 122 620 - -
Ssu3g0163 772 Gene3D - 349 487 - -
Ssu3g0163 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Ssu3g0163 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 118 IPR037045 -
Ssu3g0163 772 Gene3D - 637 770 - -
Ssu3g0163 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 16 771 - -
Ssu3g0163 772 CDD Peptidases_S8_3 116 584 IPR034197 -
Ssu3g0163 772 Pfam PA domain 379 464 IPR003137 -
Ssu3g0163 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 771 IPR045051 -
Ssu3g0163 772 Pfam Fibronectin type-III domain 667 768 IPR041469 -
Ssu3g0163 772 CDD PA_subtilisin_like 356 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0163 Ssu-Chr3 2945191 2947509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0163 23 771 Subtilisin-like Serine Gene Family AT1G01900 54.993 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0163 - - gmx:100790006 1279.23