Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0138 ATGAGTGTGATGATTCCTAGGAATACTACTATTCCTGTAAAGAGGACACAACAATATGAAACTGTTGCAGATAACCAATCCTCTGTCCTGATTAAGGCCAATGCAATGAATTCTTTGGATGATTACGTTTACAAGACGAGGAATGCTTTGAAGAACAAGTATATTAGTTCAAAGCTTTGCTCACAAGAAAGGGAGAAGATCAGTTCTGTAATTACTAAGGCCACAAATTTGCTTGATGGTGATAACCAGCAGGATGAAATGGAGGTGTTTGAGGATTCTCTGAAGGAGCTTGTGAGCCTCTTTGATCACATCATGGGCAAGAATTGTTAG 330 0.3909 MSVMIPRNTTIPVKRTQQYETVADNQSSVLIKANAMNSLDDYVYKTRNALKNKYISSKLCSQEREKISSVITKATNLLDGDNQQDEMEVFEDSLKELVSLFDHIMGKNC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0138 109 Gene3D - 33 109 IPR029048 -
Ssu3g0138 109 PANTHER HEAT SHOCK PROTEIN 70KDA 31 107 IPR013126 GO:0005524|GO:0140662
Ssu3g0138 109 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 32 IPR029047 -
Ssu3g0138 109 PANTHER HEAT SHOCK PROTEIN 70KDA 1 32 IPR013126 GO:0005524|GO:0140662
Ssu3g0138 109 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 32 - -
Ssu3g0138 109 PANTHER HEAT SHOCK 70 KDA PROTEIN 31 107 - -
Ssu3g0138 109 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 32 IPR029047 -
Ssu3g0138 109 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 35 107 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0138 Ssu-Chr3 2666718 2667326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0138 1 32 Calmodulin-binding Proteins AT3G12580 59.375 1.69e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0138 K03283 - gmx:102662496 114.005