Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0132 ATGGACCTCTTTGAAGAGTGTATGGAAACAGTGGGTAGGTGTCTTTCTGATGCTCACATGGACAAGAGCAGTGTACATGACATTGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGGAGCTATTGCAGGATTGCTTCGAGGGGAAGAAACTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTTCCAGACTTGGTGCTGTTGGATGTTACACCACTGACACTTGGTTGGCAATTAATAGGAGATATCATGGGTGTTATGATTCCTAGGAATACTACTATTCCTGTAAAGTGGACAAAAGAATTCTACACAGTGAAAGATTACCAAACTTCTGTTCTGATTAAGGTTTATGAGGGTGAGAGGAAAAGAGCCAGTGATAATAATTTGATGGGTTCTTTTACACTTTTTGGTGTTCCTCCAGCCCCTCGTGGCCATCCTTTTGACGTGTGCTTTGCCATAGACGAAAATGGCATTCTATCTGTTTATGCTGAGGAAAGAACCACTGGCAATAAGAACCAGATTACCTTAATCAACAAAGAAAGACTAACAACCGAAGAAATTTCAAGATTAATTCAGGAAGCTGAGAAGTACCATGCTGAAGATAAGAAGTTCCTTAGGAAGGCCAGTGCAATGAATTCCTTGGATCATTACGTTTACAAGATGAGGAATGCTTTGAGGAAGAAGGATGTCAGTTCAAAGCTTCGCTCACAACAAAGGAAGAAGATCAGTTCTGCAATTACTAAGGCCACAAATTTGCTAAATGGTAATCACCAGCAGGATGAAGCACAAGTATTTGAGAATTATCTGAAGGAGCTTACCAGCCTCTTTGAACCCATCGTGGGCCAGATTGGTTAG 912 0.4221 MDLFEECMETVGRCLSDAHMDKSSVHDIVLVGGSSRIPKVQELLQDCFEGKKLCKSINPDEAVAYGAAVQAALLSEGIKNVPDLVLLDVTPLTLGWQLIGDIMGVMIPRNTTIPVKWTKEFYTVKDYQTSVLIKVYEGERKRASDNNLMGSFTLFGVPPAPRGHPFDVCFAIDENGILSVYAEERTTGNKNQITLINKERLTTEEISRLIQEAEKYHAEDKKFLRKASAMNSLDHYVYKMRNALRKKDVSSKLRSQQRKKISSAITKATNLLNGNHQQDEAQVFENYLKELTSLFEPIVGQIG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0132 303 Pfam Hsp70 protein 2 301 IPR013126 GO:0005524|GO:0140662
Ssu3g0132 303 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 80 234 IPR029047 -
Ssu3g0132 303 Gene3D - 7 54 - -
Ssu3g0132 303 SUPERFAMILY Actin-like ATPase domain 2 75 IPR043129 -
Ssu3g0132 303 Gene3D - 231 302 IPR029048 -
Ssu3g0132 303 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Ssu3g0132 303 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 301 - -
Ssu3g0132 303 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 229 299 IPR029048 -
Ssu3g0132 303 Gene3D - 55 72 - -
Ssu3g0132 303 PRINTS 70kDa heat shock protein signature 163 179 - -
Ssu3g0132 303 PRINTS 70kDa heat shock protein signature 83 102 - -
Ssu3g0132 303 PRINTS 70kDa heat shock protein signature 57 77 - -
Ssu3g0132 303 PRINTS 70kDa heat shock protein signature 25 41 - -
Ssu3g0132 303 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 79 230 IPR029047 -
Ssu3g0132 303 PANTHER HEAT SHOCK PROTEIN 70KDA 1 301 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0132 Ssu-Chr3 2499690 2500601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0132 1 302 Calmodulin-binding Proteins AT3G12580 60.328 7.40e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0132 K03283 - gmx:102667572 409.068