Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0052 ATGGCTACCATTTCACTCAGGCATGACCGGCAAGAAAACAACACTAATCAGCAACGTGAAGTCATCACTGAAGAAATCCATGGACTCATAAGAGTCCACAGAGATGGACGTGTAGAAAGGCCACCAATTGTGCCTAGTGTCTCATGCGCAGTGGCATCAGAACGTGGTGTCACACCCAGAGATGTTATGATCAACAAAGAGACCAACTTATGGGCACGTATTTATGTGCCAATAAGTTGTCACACCAAGGTTCCTTTGCTTGTTTACTTCCACGGTGGTGGATTCTGTGTTGGTTCTGCTGCTTGGAGCTGTTACCATGAGTTCTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTTTCTCTGTGGATTACCACTTAGCCCCTGAGAACCGTCTTCCAATGGCATATGATGATGGTTTCAACGCTCTCATGTGGGTGAAAAGAGAGGCACTGAATGGCTCCAGTGTGCAAAAGTGGTGGCTGAGTCATTGCAACCTATCTTCCCTTTTCCTAGCCGGTGACAGTGCAGGTGCCAACATAGCTTACAATGTGGCCACACGCATGGGATCAACAACATCAAGCACTCCATTATCTCTCAAGGGTGTTGTATTGATCCAACCTTTCTttggaggagaagaaagaacTAGTTCTGAGAAGCATTCCCTTCAGCCACCCAATTCAGCACTCACTTTATCCGTGTCCTTTCTGAACTGGGGTGTTCTTCAGAAAGGAATACGAGTCAGAGAACTTCTTGAAAGGGAATGA 768 0.4518 MATISLRHDRQENNTNQQREVITEEIHGLIRVHRDGRVERPPIVPSVSCAVASERGVTPRDVMINKETNLWARIYVPISCHTKVPLLVYFHGGGFCVGSAAWSCYHEFLTNLASKANCVIFSVDYHLAPENRLPMAYDDGFNALMWVKREALNGSSVQKWWLSHCNLSSLFLAGDSAGANIAYNVATRMGSTTSSTPLSLKGVVLIQPFFGGEERTSSEKHSLQPPNSALTLSVSFLNWGVLQKGIRVRELLERE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0052 255 Pfam alpha/beta hydrolase fold 87 223 IPR013094 GO:0016787
Ssu3g0052 255 Gene3D alpha/beta hydrolase 27 245 IPR029058 -
Ssu3g0052 255 SUPERFAMILY alpha/beta-Hydrolases 24 222 IPR029058 -
Ssu3g0052 255 PANTHER ARYLACETAMIDE DEACETYLASE 10 239 - -
Ssu3g0052 255 PANTHER CARBOXYLESTERASE 6-RELATED 10 239 - -
Ssu3g0052 255 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 170 182 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0052 Ssu-Chr3 1050647 1052403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0052 1 239 Carbohydrate Esterase AT5G16080 53.600 6.59e-85 255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0052 3 1050647 1052403 Ssu3g0052 3 1050647 1052403 ECH