Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3151 ATGGAAGCAGCACCGGCAACACTGACAGGTTATCGGCTCCAACACTACTTGGCTACTCAGAGCAAGTCCATCAAAATCTTTACGGGCTTGATTCTCCTATTGACTCTATCTAACTCAGTTGCATCAAGTGCCATTGTCAAGACCTTACCGGGCTTCCTTGGTGAGCTACCATTCCGGCTTGAAACTGGGTACATTGGCGTAGGAGAAAAAGATGAGGTTCAGCTTTTCTATTACTTCATTCAATCCGAGGAGCGGCCAGCAACTGACCCACTGATGCTTTGGCTCACTGGAGGACCTGGTTGCTCAGGTTTATCTGGTCTCATTTACGAAATCGATAACAAAGCTGGAAATTTACCGCCAATCTATCTCAAaGGTTATGTTCTAGGAAACCCGTTAACCGATGAGAAAATTGATTACAACTCGAGAATTAAGTTTGCTAATAGAGTTGCACTTTTATCTGATGGACTTTACGAGGAAACTAAATTGGATTGTCATGGAGAGTATATTTACCCAAATAAAAGTGATGCTCGGTGTATTCAGGATCTCGAGAGAGTCAATATGTGCTTAAGAGACATTTTCATAGGCATGGTGTTGGAACCATCTTGCGCTTACTCTGCAAAGCTGAACAAAGTTAACTGGGGACCAAGCCCTCGCGATGTCTCAGATGCTCTCCTTTTAGAAGTTAATCCTACTTCAGATGCTCTCCTTTTAGACGTTAATCCTCCTGAGCTATGGTGCAGGGCTGATAATTATTTGTTCATATACATTTGGGCTAATGACAAAGAAGTACAAGAAGCTCTACACGTTAGAAATGGAACTATACAACAGTGGGACAGATGCAATAAAAGCTTATCTAATGTGTATGATGACATAATAAGTAGCCTAGATTATCACCGAAACTTCACCAGCGAAGATCTTACAGCAATCATTTACAGTGGAGATCACGATATGGTTATTCCATACGTGGGCACCGAAGAATGGATACAATCTCTGAATTTGACTGTTTCTTCTGATGACGAGTGGAGGCCATGGTTTGTCGATGGGCAAGTTGCAGGTTATACAGAGATATACCGAATGAAAAAGTACAGTATAACATTTGCGACTGTAAAGGGAGCAGGCCACACAGCTCCAGAGTACAAGCCCAAGCAATGCTTTAACATGATTAGGAGGTGGTTTGCTACTTACTTTCTTTAG 1194 0.4221 MEAAPATLTGYRLQHYLATQSKSIKIFTGLILLLTLSNSVASSAIVKTLPGFLGELPFRLETGYIGVGEKDEVQLFYYFIQSEERPATDPLMLWLTGGPGCSGLSGLIYEIDNKAGNLPPIYLKGYVLGNPLTDEKIDYNSRIKFANRVALLSDGLYEETKLDCHGEYIYPNKSDARCIQDLERVNMCLRDIFIGMVLEPSCAYSAKLNKVNWGPSPRDVSDALLLEVNPTSDALLLDVNPPELWCRADNYLFIYIWANDKEVQEALHVRNGTIQQWDRCNKSLSNVYDDIISSLDYHRNFTSEDLTAIIYSGDHDMVIPYVGTEEWIQSLNLTVSSDDEWRPWFVDGQVAGYTEIYRMKKYSITFATVKGAGHTAPEYKPKQCFNMIRRWFATYFL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3151 397 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 118 396 - -
Ssu2g3151 397 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 20 111 - -
Ssu2g3151 397 Gene3D alpha/beta hydrolase 39 112 IPR029058 -
Ssu2g3151 397 SUPERFAMILY alpha/beta-Hydrolases 43 395 IPR029058 -
Ssu2g3151 397 ProSitePatterns Serine carboxypeptidases, histidine active site. 364 381 IPR033124 GO:0004185
Ssu2g3151 397 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 118 396 IPR001563 GO:0004185|GO:0006508
Ssu2g3151 397 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 111 IPR001563 GO:0004185|GO:0006508
Ssu2g3151 397 Pfam Serine carboxypeptidase 113 393 IPR001563 GO:0004185|GO:0006508
Ssu2g3151 397 Pfam Serine carboxypeptidase 50 111 IPR001563 GO:0004185|GO:0006508
Ssu2g3151 397 Gene3D alpha/beta hydrolase 113 395 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3151 Ssu-Chr2 93743993 93756292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3151 257 393 Calmodulin-binding Proteins AT2G22960 51.079 9.70e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3151 K16296 - jre:108983123 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3151 2 93743993 93756292 Ssu2g3151 2 93743993 93756292 ECH