Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3134 ATGTTTGTTGTCTTTTGGCGAAAAGGTGATCGATGTGATATTAGGATCATGGTCAAAGATAGACCTTCAGGTGTGCTTTTGTTCGTTGTATTTGTATGTATGTTATCTCTCAAGGGCGTTTCTGGAGCAGACCCGATTTTTACTTATTGTCCGAGTCCGAGTGAATTCCCATTATACACCCCCAATAGTTCATTCCATAAGAACCTCAAGCTTGTTCTGGAGTTGCTTTCCTCCAACAACGCTTCAACGGCAGGTTTCTATGACGCATCCGTAGGAGAAGGGTCAGACGGAGTGTACGGACAAGTACTGTGCAGAGGGGACATCACCAACTCCACAGTTTGCCAAGAATGCATTGAGAAAGCAAGCCAAGATATCATGAAGAGATGCAAGAGCGAAGATGCAATGATATGGTATGAGCTTTGCCAAGTACGGTACTCCTTTCAGAGCTTTGCCATCGAGCCTTATACCGGAAAGTATCCGCAGCAGAACGATCATTACAAGAATGTCTCCGATCCTATCCGATTCAGTGAATACTTGACATATTTAATGAACAATCTCTCAAACCAGGCTTCTTTCCATCCTGCTAATAACATGTTTGCATCTGGGCAAATTGACTTTCCTGGGAACAAGACAATTTATGGCTTAGTCCAGTGTACCAGGGACTTGTCCCAAACAGACTGTAGTAGTTGTTTGAGTTCTGCCTTCACAGAACTTAGTGCATGCTGCTCCTACCATCAAGCCGGGATTATTGTTAGTCGGACTTGCAATATGAGGTTCCAATTGTCTCGGTTCTTCAATGCTTCGTCTGCATATCGGTTGATTTACCCAACTTCCACAGgAGGGAAATGGATGCCCTGGATGTTTGTGGTGGTTATATGTGGGTCAATTTTAATATTCGCACTTCTTATTGGGCTGGGCACTGGTTGCCTCCGacgaaaaagaaatagagacaGAGatgaagaaataaGTGAAAGATCGCTATTACAAGAGTTGTCTACCGCCAAGAATGTTGCAGTCACACAAGAAGGTGACTTGATTAGTTCCGATGAAGTGTTGTTCATGACTTTAGATGCCATTAAGGCTGCTACTGATGACTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTACCAGTTGGTAATGAAATAGCAGTTAAAAGATTAATGAGAAATTCTTGGCAAGGCATAGAGGAATTCAAAAATGAGGTCATACTGATCGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGCTGTGCCTTAGAGGGAGATGAAAAGCTACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGATCCAGAAAAACGTTCAAAACTTGATTGGAAGACATACAGTGGCATTATCAGTGGCATAGCCAGAGGACTACTGTATCTTCACGAGGAGTCTCGCCTTAAAATCATTCACAGAGACTTAAAGCCAAACAATGTGTTGTTAGACCACGAACTGTTGGCCAAAATATCAGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAAAATGCAGCAAACACGAAGAGAGTTGTGGGAACATATGGATATATGGCTCCTGAGTATGCAATGGAAGGATTGTTCTCTGTGAAATCTGATGTCTTCAGCTTTGGTGTCATCTTGCTTGAAATCATCAGTGGGAAAAGAAATAGTGGCTTTTACATAACCGAACTTGCACCGACACTGCTGgcatatGCGTGGCGACTGTGGAGTGAAGGAAAAGAATTGGACTTTGTGGATTCAATGCTATTGGAATCATGTCTTGCCTCTGAAGTTGTAAGGTGTATGCACATTGGGCTGCTGTGCGTGCAGGAAAATCCAGAACACAGGCCCACCATGTCAAATGTGGTGGTTCTCCTGGGAAGTGAATCAATGGCTCTTCCCCAACCAAGACAGCCAGCATTTTCTTTGGGTAAGGTGCTTCATGTCGATCCATCTACAACGACCAATCCTTCAGTGGATGAGATGATATTATCTGATATTTTACCACGATGA 2046 0.4223 MFVVFWRKGDRCDIRIMVKDRPSGVLLFVVFVCMLSLKGVSGADPIFTYCPSPSEFPLYTPNSSFHKNLKLVLELLSSNNASTAGFYDASVGEGSDGVYGQVLCRGDITNSTVCQECIEKASQDIMKRCKSEDAMIWYELCQVRYSFQSFAIEPYTGKYPQQNDHYKNVSDPIRFSEYLTYLMNNLSNQASFHPANNMFASGQIDFPGNKTIYGLVQCTRDLSQTDCSSCLSSAFTELSACCSYHQAGIIVSRTCNMRFQLSRFFNASSAYRLIYPTSTGGKWMPWMFVVVICGSILIFALLIGLGTGCLRRKRNRDRDEEISERSLLQELSTAKNVAVTQEGDLISSDEVLFMTLDAIKAATDDFSDTNKLGQGGFGAVYKGVLPVGNEIAVKRLMRNSWQGIEEFKNEVILIAKLQHKNLVRLLGCALEGDEKLLIYEFMSNKSLDQFIFDPEKRSKLDWKTYSGIISGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELLAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISGKRNSGFYITELAPTLLAYAWRLWSEGKELDFVDSMLLESCLASEVVRCMHIGLLCVQENPEHRPTMSNVVVLLGSESMALPQPRQPAFSLGKVLHVDPSTTTNPSVDEMILSDILPR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3134 681 SUPERFAMILY Protein kinase-like (PK-like) 347 636 IPR011009 -
Ssu2g3134 681 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 679 - -
Ssu2g3134 681 ProSiteProfiles Gnk2-homologous domain profile. 157 264 IPR002902 -
Ssu2g3134 681 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 29 679 - -
Ssu2g3134 681 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Ssu2g3134 681 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Ssu2g3134 681 Gene3D - 159 264 IPR038408 -
Ssu2g3134 681 Gene3D - 47 150 IPR038408 -
Ssu2g3134 681 Gene3D Phosphorylase Kinase; domain 1 341 441 - -
Ssu2g3134 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Ssu2g3134 681 Pfam Salt stress response/antifungal 58 147 IPR002902 -
Ssu2g3134 681 Pfam Salt stress response/antifungal 168 260 IPR002902 -
Ssu2g3134 681 ProSiteProfiles Gnk2-homologous domain profile. 44 150 IPR002902 -
Ssu2g3134 681 ProSiteProfiles Protein kinase domain profile. 366 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3134 681 SMART serkin_6 366 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3134 681 CDD STKc_IRAK 372 634 - -
Ssu2g3134 681 Pfam Protein tyrosine and serine/threonine kinase 369 635 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3134 Ssu-Chr2 93402180 93405783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3134 23 654 Receptor kinase-like Gene Family AT4G05200 44.207 1.73e-175 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g3134 PK_Tyr_Ser-Thr 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3134 - - gmx:102669229 1107.43