Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3112 ATGAACTCCGAGAGCGGAAGATTAGGAGCACAGCCACTTCATCTCTTGACACAAAACTGCAATTCACCTTCCTTCCCTTGTAATTCTATCTTCTCTACCTTCCCTACAATGGCCAACGAGAAGGAGATAGTAAAGGAGCTTCTTCCCCTTATAAGAGTCTACAAGGATGGCACTGTGGACCGTCTCCTAAGCTCTCCAAACGTACCACCCTCCCCCGAAGACCCCGAAACTGGGGTCTCATCCAAAGACATCGTCATCGCAGAGAACCCCTTCCTCTCTGCACGCATTTTCCTCCCAAAATCCCACAACAATCACACCCACAAACTTCCCATCTTGGTCTACTTCCACGGTGGCGCCTTTTGCGTTGAATCAGCCTTCTCCTTCTTCGTCCATCGCTACCTCAACCTCTTAGTCTCCGAAGCAAACATAATAGCCGTGTCTGTTGATTTCAGACTCCTTCCACACCACCCTCTTCCTGCAGCCTACGAAGATGGTTGGACCACTCTCCAGTGGATTGTTTCCCACGCCACCAATAACGCCACCAACCCGGAGCCATGGTTACTCAACTATGCTGACTTTAACAAACTTTACGTAGGGGGTGACACCAGCGGTGCTAACATTGCACACGACTTGGTTATGCGCGCAGGCACAGAATCCCTGCCTGGGGATCTCAAAATATTGGGTGCAATACTGTGCTGCTCCTTCTTTTGGGGATCCAAGCCAATTGGGTCGGAGCCCGTTGAGGAGCACGAGCAGAGTTTGGCCATGAAGGTGTGGAGCTTCTCGTACCCTGATGCAACTGGTGGAATTGATAACCCAAGGATCAACCCTTGTGCTCCTGGGGCACCTTCCTTGGCTACGCTTGGTTGCTCTAAGATGCTGATTACTATTACTGGGAAGGACGAGTTCAGAGACAGAGATATTCTGTACTACGAGACCGTTAAGAACAGTGGGTGGCAAGGTGAAGTGGAACTGTTTGATGCTGGCGATGAGGCGCATGCTTTCCAGCTCTTCAAGCCTGAAACTGATAGGGCTAAAGCAATGATCAAACGCTTGGCTTCTTTTCTCGCGTGA 1074 0.5037 MNSESGRLGAQPLHLLTQNCNSPSFPCNSIFSTFPTMANEKEIVKELLPLIRVYKDGTVDRLLSSPNVPPSPEDPETGVSSKDIVIAENPFLSARIFLPKSHNNHTHKLPILVYFHGGAFCVESAFSFFVHRYLNLLVSEANIIAVSVDFRLLPHHPLPAAYEDGWTTLQWIVSHATNNATNPEPWLLNYADFNKLYVGGDTSGANIAHDLVMRAGTESLPGDLKILGAILCCSFFWGSKPIGSEPVEEHEQSLAMKVWSFSYPDATGGIDNPRINPCAPGAPSLATLGCSKMLITITGKDEFRDRDILYYETVKNSGWQGEVELFDAGDEAHAFQLFKPETDRAKAMIKRLASFLA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3112 357 PANTHER ARYLACETAMIDE DEACETYLASE 41 356 - -
Ssu2g3112 357 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 112 128 IPR002168 GO:0016787
Ssu2g3112 357 SUPERFAMILY alpha/beta-Hydrolases 38 356 IPR029058 -
Ssu2g3112 357 Pfam alpha/beta hydrolase fold 112 336 IPR013094 GO:0016787
Ssu2g3112 357 Gene3D alpha/beta hydrolase 30 357 IPR029058 -
Ssu2g3112 357 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 41 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3112 Ssu-Chr2 92955574 92956647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3112 40 356 Carbohydrate Esterase AT3G48690 39.506 1.30e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3112 - K13258 gmx:547489 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3112 2 92955574 92956647 Ssu2g3112 2 92955574 92956647 ECH
Ssu2g3112 2 92955574 92956647 Ssu7g0608 7 12380566 12381552 PCT
Ssu7g0609 7 12390313 12391278 Ssu2g3112 2 92955574 92956647 PCT