Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3102 ATGTCGTTAGCTATCTTTCTGCCTTGCATTCTTGCACTACTTACACATCTGAATGGCTTACATGCCATAGAACCAAATACAAACATCATTGCCGGATCAAATTCTACTTGGAAGTCAGGCTCGGGTGATTTTGAATTTGGATTCTACGGTCTTCCCAGTGGTCTCTTTCTTGTGGGAATATGGTTTGGAAGAATCCCAGAGAGAACACTGGTATGGTACCAGAGTCCGCGTATGGAACCAAATTCCCAAATCCAATTCACTTCTGCTGGACAACTTGTGGTAGCATACCCAGACGGAACTACTGCTCAGATGATATATAGTGGAGGAAACGGTGGTGCTGCAACTTCTGCCCACATGCAAGATGATGGCAATTTTGTCATGAAGGACTCCAACTCAAAATCTGTGTGGGAGAGTTTCAGCTATCCAGCCAACACAATCTTACCGGGCCAAACCTTGCAGAGCAATCAAACCATCTATTCCAAGGGGAAAGGACCTTCAAACTACTCGTTGGGAAATTTCATGTTACAAATGCAAACCGATGGCAACTTGCTGCTCAAAGCATACCAATGGGCTGACCCTGCTTATTGGTACACTTCAACCATGTACCCCAATGACAATGTGAATTTGGTGTTTGATGTTACTAGTGCTCTCATGTACCTTGTCAGCGGCACTAGGAACATCTACTCTTTAACCAACAGCACTTCAACCCCGGTGGAGGATTACTATCACCGTGCTACAATAGATGAGAATGGCAATTTCCAGCAATATGCATATCACAAAAGGAATGGCACCGGTTGGAGGAGGGTTTGGAGAGCTGTGGAGGATCCTTGCAGAGTGGGTGCTATTTGTGGTGTGTATGGTTTGTGCACTTCTCCGAACAATGAATCAGTCAAGTGTGAGTGCATTCCAGGGTATATCCCATTGGATCGTGAAGATGCGTCCAAAGGGTGTCACCCACCAGCTGTAATCAATTACTGTGTAGAGAAGAACTTCACGCTGCAGGTGTTTGACGACACTGATTTCCAATTTGATACTAATTTTGTTCGCATAACTAATGTTGATTTGGAAGGTTGTAAGAAGTTGGTCATGGATGATTGTAATATCATTGCTGCAACTTATAACGCTTCCACCTCCACGTGTGCCAAGAAGAGGCTGCCCTTGCTGAATGCTAGAAATAGCTCTTCTTCACAGGGACAGAAAGCACTGCTTAAAGTTCCTAACAATGTTGAGTCTGGGACATCTGAAGTTCCCAAGAAGAAGAGTTTTAatgtaagaatttttttgaagGTTATGATTGCAGTTACTGCAACTCTTGCCTGTTTCTTTGGTGCCCTTGCTGTCTATTATCATCCTTTCACTCAGAGACtaacaagaagaaagaagtatCTGAATGCAAACGCTATTGGAATCAACTTCAGAGAATTCACGTTCCAGGAGCTGCATGAAGCAACAAATGGATTCACTAGGATTCTTGGAAAGGGGTCTTCAGGCAAAGTCTACCGTGGTGCTTTAATAATAGATGATGCAGAGATTGGTATTGCAGTAAAGAAACtggaaaagaaaattgagaaaagtgAAAGCGAATTCATGACTGAGCTCAAAATTATTGGCCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAGAGTAGTCATCGAATTCTTGTGTATGAGTTGATGCCAAACGGAGCACTGTCCAGATTTTTGTTTGGAGAAGGAGAAAGGCCTCAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGCTTACTATACTTGCACGAAGAGTGCCACACCCAAATCATACATTGTGATATCAAGCCCCAAAATGTGTTACTTGATGCCAATCTCACTGCAAAGATTGCAGATTTTGGGCTTTCCAAGATTTTGAGCAAAGATCAAACTAGAACAAGCACTAATTTAAGAGGGACAATGGGATATATGGCACCTGAATGGCTAAGGAGTGCACCAATAACTGCCAAAGTTGACATATACAGTTTTGGTGTTATGCTATTGGAGATTATTTGCAGCAGGAGGCACATCGAGTCTTGTCAAGATGGAAATGACAGTGAAGATGATGATTTGGTTCTTTCAAATTGGGTTTTAAGGTGTGTGGTGTCTAGGAAACTAGAGGTAGTGGTGAGACATGACTCAGAAGTGCTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTGTGGTGTGTTCATCCACATCCAGCTCTTAGACCTTCAATGAAGCAGGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGGGTTCCTCCTTTGGTTTATGATCAGATGATGGCAGACCAGGGCTTATAG 2352 0.4247 MSLAIFLPCILALLTHLNGLHAIEPNTNIIAGSNSTWKSGSGDFEFGFYGLPSGLFLVGIWFGRIPERTLVWYQSPRMEPNSQIQFTSAGQLVVAYPDGTTAQMIYSGGNGGAATSAHMQDDGNFVMKDSNSKSVWESFSYPANTILPGQTLQSNQTIYSKGKGPSNYSLGNFMLQMQTDGNLLLKAYQWADPAYWYTSTMYPNDNVNLVFDVTSALMYLVSGTRNIYSLTNSTSTPVEDYYHRATIDENGNFQQYAYHKRNGTGWRRVWRAVEDPCRVGAICGVYGLCTSPNNESVKCECIPGYIPLDREDASKGCHPPAVINYCVEKNFTLQVFDDTDFQFDTNFVRITNVDLEGCKKLVMDDCNIIAATYNASTSTCAKKRLPLLNARNSSSSQGQKALLKVPNNVESGTSEVPKKKSFNVRIFLKVMIAVTATLACFFGALAVYYHPFTQRLTRRKKYLNANAIGINFREFTFQELHEATNGFTRILGKGSSGKVYRGALIIDDAEIGIAVKKLEKKIEKSESEFMTELKIIGRTHHRNLVRLLGFCIESSHRILVYELMPNGALSRFLFGEGERPQWGQRIEMALGVARGLLYLHEECHTQIIHCDIKPQNVLLDANLTAKIADFGLSKILSKDQTRTSTNLRGTMGYMAPEWLRSAPITAKVDIYSFGVMLLEIICSRRHIESCQDGNDSEDDDLVLSNWVLRCVVSRKLEVVVRHDSEVLNDFKRFEEMALVGLWCVHPHPALRPSMKQVMQMLDGTVEVGVPPLVYDQMMADQGL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3102 783 SUPERFAMILY Protein kinase-like (PK-like) 472 767 IPR011009 -
Ssu2g3102 783 Gene3D - 142 279 - -
Ssu2g3102 783 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 773 - -
Ssu2g3102 783 Pfam Protein kinase domain 489 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3102 783 ProSitePatterns Protein kinases ATP-binding region signature. 491 517 IPR017441 GO:0005524
Ssu2g3102 783 Pfam S-locus glycoprotein domain 238 307 IPR000858 GO:0048544
Ssu2g3102 783 Pfam D-mannose binding lectin 75 157 IPR001480 -
Ssu2g3102 783 SMART blect_4 28 142 IPR001480 -
Ssu2g3102 783 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 773 - -
Ssu2g3102 783 SMART serkin_6 485 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3102 783 Gene3D Transferase(Phosphotransferase) domain 1 564 770 - -
Ssu2g3102 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 200 IPR036426 -
Ssu2g3102 783 CDD STKc_IRAK 491 763 - -
Ssu2g3102 783 ProSiteProfiles Protein kinase domain profile. 485 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3102 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Ssu2g3102 783 Gene3D Phosphorylase Kinase; domain 1 459 563 - -
Ssu2g3102 783 ProSiteProfiles Bulb-type lectin domain profile. 20 140 IPR001480 -
Ssu2g3102 783 Gene3D - 21 141 IPR036426 -
Ssu2g3102 783 PIRSF SRK 1 781 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3102 Ssu-Chr2 92720002 92722353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3102 406 766 Receptor kinase-like Gene Family AT5G45780 36.885 1.04e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu2g3102 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3102 - - gmx:102662509 1297.34