Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3101 ATGGCCACCAAAATCCTTGTTCTCTTTGTTGCCTTGCTTCTATGTTCCTATGTTCCAAGGAACGCTAACTCAATTGAACTGGGGTCCAGCATTGTGGCTGGCACCAATTCATCTTGGCGATCATCCTCTGGTGATTATGCCTTTGGGTTCTATCACCTTGTTAGTGGCAGCTATCTCGTTGGAATTTGGTTTGACCAGATTCCACAAAAAACACTGGTTTGGTCTGCACACCGCGACAAACCAGTTGAAATTGGATCATCCATCAATCTCACACAAAATGGCCAATTTGTGCTCCAACCTGTCAAAGGGGCTTCATTTCCAATTTACAATGGAACAAACACAACTTCTGCGGTGATGCAGGATGATGGAAATTTCGTCCTGAGGAATTCACTTTCCAAAGTTATCTGGCAAAGCTTTGATTCACCCACGGATACTCTTCTACCAGGCCAAACTTTGAATACGGGTCAGAAGCTCTACTCCAATGCCAATGGATCAGTAGACTACTCAACAGGACAATACAGTTTGGAGATCCAACAATCTGATGGCAACATTCTTCTTAAAGCTTATCGGTTCACGGATTCTGCCTATTGGTGGAGTGCAACTGCCCAAAACAGAGGTGTGAGAATTGTTTTTGACAACACCACAGCTTCTCTTTACGCGGTCAATGTCACCaaccaaattatatataacatggCAACTCAAGAAAAAGGTGCAATCAAAGATTACTATCATCGTGCGCTGGTCGATGACCATGGAAACTTTCAGAAGTGGACTTACCATAAAGAAAATGGAAGTAAGTGGACATCTGTGTGGAAGGCCGTAACAAAGCCTTGCACTGCGACTGCCCTTTGTGGGGTGTATGGCTTTTGCAATACAACTGATTCTGACACCCAAACATACAGTTGTGAATGCTTGCCTGGCTATACTCCTTTGGATCCAAGTGCACCCTCCAAAGGGTGCTATCTCAGTCAGGCCAAGGACTTGTGTGCTGCAAATTCCTCTGCCCCAGACTTTAAGGTGGAAGTGATAGCAATTCAAGATACTAATATACCAAACGatggttatttttttcttgatctACAAGTCATAAATAACACGGATTTGGAAAGCTGCAAGCGGGAACTGATGGACGATTGTCTCTGCATGGCTGCTGTTTTAGATGGCACTGATTGCCATAAGAAAAAGTGGCCGATTATAAATGCCTTTAGAATCATCCCTGACACTAGTAATCGTGTCACGCTGATTAAAGTTCCTCTGGCTGACAATAACATGGACAATGAAAAGGATTCATCATCTTTGGTTGCTTTGATAGTGGCTTTCATCTCTTGCTCACTACTTGCTGCATTGTTTGCAGCTACTGCCATTTATCATCACCCCGTTTGTCGGTATCTCATACACAAAGGAGCACGACCAAAGCCTAAGCCAAAGCCTATGGATATCAACCTAAAGGCATTCTCATTCCAGCAGCTGAGAGAAGCAACAAATGGATTCAAGGACAAACTTGGTCGAGGTGCTTATGGTACGGTGTATAGTGGGATTTTAAACTTGGAGAGTCAACAGGTTGAGGTTGCTGTCAAACAACTGGAGCATGTAGAAGATCAAGGTGAGAAAGAATTTGTTACAGAAGTTCAAGTTATTGCTCTCACTCATCATAGAAATCTTGTTGGGTTATTGGGCTTTTGCAATGAGCAGAATCATAGGCTTCTGGTTTATGAGAAAATGGAAAATGGGACACTATCCAACTTCCTTTTTGGAGAGGGGGGTAAACCCAGCTGGGAGAGCAGAGTCAGGATTGTGCTTGAAATTGCAAGAGGCTTATTATATCTGCATGAAGAGTGTGACCAACAAGTCATCCATTGTGACATAAAGCCACAAAATGTTCTCCTTGACTCTAGCTACACTGCAAAGATTTCAGATTTTGGTTTGGCAAAGCTACTAATGAAAGATAAAACTCGAACAAACACCAATGCTAGAGGGACAATGGGATATATGGCACCGGAATGGCTCAAAAATGTACCTGTTACTGCAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGCTGGAAATCATATTTTGCAGAAGGCACATCGAGTTGCATCAAATTGAGGATGAAACAACGGGTGATGACATGATACTCATAGATTGGGTTCTATATCTggcaaaagaaaacaatttaagaGCCGCAGTGATTCATGATCTTGAAGTTGAAAGTGATTTCAAGAGGTTTGAAAGAATGGCAATGGTTGGATTATGGTGCGTAAATCCCAATCCAACTCTTCGACCATCTATGAAAATGGTGGTACAGATGTTGGAAGGAAATATAGAAGTGGGTGTTCCACCACTTatctga 2352 0.4167 MATKILVLFVALLLCSYVPRNANSIELGSSIVAGTNSSWRSSSGDYAFGFYHLVSGSYLVGIWFDQIPQKTLVWSAHRDKPVEIGSSINLTQNGQFVLQPVKGASFPIYNGTNTTSAVMQDDGNFVLRNSLSKVIWQSFDSPTDTLLPGQTLNTGQKLYSNANGSVDYSTGQYSLEIQQSDGNILLKAYRFTDSAYWWSATAQNRGVRIVFDNTTASLYAVNVTNQIIYNMATQEKGAIKDYYHRALVDDHGNFQKWTYHKENGSKWTSVWKAVTKPCTATALCGVYGFCNTTDSDTQTYSCECLPGYTPLDPSAPSKGCYLSQAKDLCAANSSAPDFKVEVIAIQDTNIPNDGYFFLDLQVINNTDLESCKRELMDDCLCMAAVLDGTDCHKKKWPIINAFRIIPDTSNRVTLIKVPLADNNMDNEKDSSSLVALIVAFISCSLLAALFAATAIYHHPVCRYLIHKGARPKPKPKPMDINLKAFSFQQLREATNGFKDKLGRGAYGTVYSGILNLESQQVEVAVKQLEHVEDQGEKEFVTEVQVIALTHHRNLVGLLGFCNEQNHRLLVYEKMENGTLSNFLFGEGGKPSWESRVRIVLEIARGLLYLHEECDQQVIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTMGYMAPEWLKNVPVTAKVDIYSFGVMLLEIIFCRRHIELHQIEDETTGDDMILIDWVLYLAKENNLRAAVIHDLEVESDFKRFERMAMVGLWCVNPNPTLRPSMKMVVQMLEGNIEVGVPPLI 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3101 783 Gene3D - 16 140 IPR036426 -
Ssu2g3101 783 ProSitePatterns Protein kinases ATP-binding region signature. 501 526 IPR017441 GO:0005524
Ssu2g3101 783 Coils Coil 514 534 - -
Ssu2g3101 783 ProSiteProfiles Bulb-type lectin domain profile. 24 140 IPR001480 -
Ssu2g3101 783 CDD B_lectin 41 142 IPR001480 -
Ssu2g3101 783 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 782 - -
Ssu2g3101 783 CDD STKc_IRAK 501 773 - -
Ssu2g3101 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 201 IPR036426 -
Ssu2g3101 783 SMART serkin_6 495 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3101 783 SMART blect_4 30 142 IPR001480 -
Ssu2g3101 783 Gene3D Transferase(Phosphotransferase) domain 1 574 777 - -
Ssu2g3101 783 Pfam D-mannose binding lectin 71 156 IPR001480 -
Ssu2g3101 783 Pfam S-locus glycoprotein domain 240 310 IPR000858 GO:0048544
Ssu2g3101 783 Gene3D Phosphorylase Kinase; domain 1 471 572 - -
Ssu2g3101 783 SUPERFAMILY Protein kinase-like (PK-like) 474 772 IPR011009 -
Ssu2g3101 783 Gene3D - 142 284 - -
Ssu2g3101 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Ssu2g3101 783 Pfam Protein kinase domain 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3101 783 ProSiteProfiles EGF-like domain profile. 274 314 IPR000742 -
Ssu2g3101 783 PIRSF SRK 1 782 IPR024171 GO:0004674
Ssu2g3101 783 ProSiteProfiles Protein kinase domain profile. 495 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3101 783 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3101 Ssu-Chr2 92716159 92718510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3101 483 781 Receptor kinase-like Gene Family AT3G53380 41.722 1.03e-67 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu2g3101 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3101 - - pvu:PHAVU_002G046100g 1324.3