Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3100 ATGGTCATGATGGTGGAACCTGCGTATACTGTGACATCTGACAGTGAAACCACTGGAGAAGAAAAATCATCTACTTTTCCTGAAATAGCAATTGGAATTGATATTGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACAAGGAATCAGAAGATTATGAAATCATATGTAACCTTCAAAGATAACATCCCTTCCAGGTGGAGTTAG 234 0.3974 MVMMVEPAYTVTSDSETTGEEKSSTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMKSYVTFKDNIPSRWS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3100 77 MobiDBLite consensus disorder prediction 1 24 - -
Ssu2g3100 77 PANTHER HEAT SHOCK PROTEIN 70KDA 7 71 IPR013126 GO:0005524|GO:0140662
Ssu2g3100 77 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 7 71 - -
Ssu2g3100 77 SUPERFAMILY Actin-like ATPase domain 29 71 IPR043129 -
Ssu2g3100 77 Pfam Hsp70 protein 30 71 IPR013126 GO:0005524|GO:0140662
Ssu2g3100 77 Gene3D - 16 76 - -
Ssu2g3100 77 MobiDBLite consensus disorder prediction 10 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3100 24 70 Calmodulin-binding Proteins AT1G16030 42.553 1.30e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3100 K09489 - gmx:100809773 144.05