Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g3098 | atggcTACCAAAATCCTTGTTCTCTTTGTTGCCTTGCTTCTATGTTCCTATGTTCCAAGGAATGTTAGCTCAATTGAACTGGGGTCCAGCATTGTGGCTGGCACCAATTCATCTTGGCGATCATCCTCTGGTGATTATGCCTTTGGGTTCTACCTCCTTGTTAGTGGCCGCTATCTCGTTGGAATTTGGTTTGATCGGATTCCACAGAAAACACTGGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAATTGGATCAACCATCAATCTCACACAAAGTGGCCAATTTGTGCTCCAACCTGTCAACGGGGCTCCATTTATAATCTACAATGGAACAAACACAACTTCTGCGGTGATGCAGGATGATGGAAATTTCGTCCTGTGGAATTCACTTCCCACCATTATCTGGCAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGACCAAACTTTGAAAATGGGTCAGAAGCTCTTCTCCAATGCCAATGGATCAGTAGACTACTCAACAGGGAAATACAGTTTGGAGATCCAGCAATCTGATGGCAACATTCTTCTTAAAGCTTATCAGTTCACGGATGCTGCTTATTGGTCGACTGGAACTAACCAAAACACAGATGTGAGAATTATTTTTGACAACACAACAGCTTATCTTTACGTGGTCAACGGCAGCGACCAAATTATACATAACTTAACAACTGATGTAACGGGTGCAATCGAAGATTATTATCATCGTGTGCTGATCGATGTCGATGGAAACTTTCAGAAGTCGATTTACCGTAAAGAAAATGGAATGGAGTGGACACCTGTGTGGAAAGCCATACCACAGCCCTGCAGAGTGATTGCACTTTGTGGTGTGTATAGCTTTTGCAATTCATCTGACACCCAACCATACAGTTGTGAGTGCTTGCCTGGCTATACACCTTTGGATCCAAGTGTACCCTCCAAAGGGTGCTATCTCAGTGAGGCCGAGGACTTGTGTGCTGCAAATTCCTCTGCCCCAGACTTTAAGGTGGAAGTGATAGCAATTCAAGATGCTGATATACCAAGCTATGATTACTATTATCTTGATCTACAAGTCATAAATAACATGGATTTGGAAAGCTGCAAGAGGGAACTGATGGATGATTGTCTCTGCATGGCTGCTGTTTTAGATGGCACTGATTGCCATAAGAAAAAGTGGCCAATTATAAATGCCAGAAGAGTCATCCCTGACACTAGCAAATATGTCACGCTGATTAAAGTTCCTCGGCTTGACTATGACACGGACAATGAAGAGGAATCACCGTCTTTGGTTGTTTTGATAGTGGCTCTCATCTCTTGCTCCCTACTTGCTGCATTGTTTGCTGCTACTGCCATTTATCATCACCCCGTTTGTCGGTATCTCATACACAAAAGGGCACCACCAAAGCCTAAGCCAAAGCCTATGGATATCAATCTAAAGGCATTTTCATTCCAACAGCTGAGTGAAGCAACAAATAGATTCAGGGACAAACTTGGTCGAGGTGCCTATGGTACGGTGTACAGTGGGATTTTAAACTTGGAGGGTCAAGAAGTTGAGGTTGCTGTCAAACAACTGGAGCATGTAGAAGACCAAGGTGAGAAAGAATTTGTTACAGAAGTTCAAGTTATTGCTCTCACCTATCATAGAAACCTTGTTGGATTATTGGGCTATTGCAATGAGCAGAATCATAGGCTTCTGGTTTATGAGAAAATGGAAAATGGGACACTATCCAACTTCCTTTTTGGAGAAGAGGGTAAACCCAGCTGGGAGAGTAGAGTCAGAATTGTGCTTGAAATTGCAAGAGGCTTATTATATCTGCATGAAGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCACAGAATGTTCTTCTTGACTCTAGCCACACTGCCAAGATTTCAGATTTTGGACTGGCAAAGCTACTCATGAAAGATAAAACTCGAACAAACACCGATGCTAGAGGGACAATGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATCTTATTTTGCAGAAGGCACATCGAGTTGCATCAAATCGAGGATGGAACAACGGGTGATGACCTGATACTCATAGATTGGGTTCTGTATCTGGCAAAAGAAAGCAATTTAAAAACCGCTGTGATTCATGATCTTGAAGCTGAAAGTGATTTCAAGAGGTTTGAAAGAATGACAATGGTTGGATTATGGTGCGTAAGTCCTAATCCAACTCTTCGACCATCTATGAAAATGGTGGTACAGATGTTGGAAGGAAATATAGAAGTGGGTGTTCCACCACTCAACTGA | 2346 | 0.4241 | MATKILVLFVALLLCSYVPRNVSSIELGSSIVAGTNSSWRSSSGDYAFGFYLLVSGRYLVGIWFDRIPQKTLVWSANRDNPVEIGSTINLTQSGQFVLQPVNGAPFIIYNGTNTTSAVMQDDGNFVLWNSLPTIIWQSFDSPTDTLLLDQTLKMGQKLFSNANGSVDYSTGKYSLEIQQSDGNILLKAYQFTDAAYWSTGTNQNTDVRIIFDNTTAYLYVVNGSDQIIHNLTTDVTGAIEDYYHRVLIDVDGNFQKSIYRKENGMEWTPVWKAIPQPCRVIALCGVYSFCNSSDTQPYSCECLPGYTPLDPSVPSKGCYLSEAEDLCAANSSAPDFKVEVIAIQDADIPSYDYYYLDLQVINNMDLESCKRELMDDCLCMAAVLDGTDCHKKKWPIINARRVIPDTSKYVTLIKVPRLDYDTDNEEESPSLVVLIVALISCSLLAALFAATAIYHHPVCRYLIHKRAPPKPKPKPMDINLKAFSFQQLSEATNRFRDKLGRGAYGTVYSGILNLEGQEVEVAVKQLEHVEDQGEKEFVTEVQVIALTYHRNLVGLLGYCNEQNHRLLVYEKMENGTLSNFLFGEEGKPSWESRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSHTAKISDFGLAKLLMKDKTRTNTDARGTMGYMAPEWLKNAPVTTKVDIYSFGVMLLEILFCRRHIELHQIEDGTTGDDLILIDWVLYLAKESNLKTAVIHDLEAESDFKRFERMTMVGLWCVSPNPTLRPSMKMVVQMLEGNIEVGVPPLN | 781 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g3098 | 781 | Pfam | D-mannose binding lectin | 71 | 155 | IPR001480 | - | |
Ssu2g3098 | 781 | SUPERFAMILY | Protein kinase-like (PK-like) | 471 | 770 | IPR011009 | - | |
Ssu2g3098 | 781 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 615 | 627 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu2g3098 | 781 | CDD | STKc_IRAK | 499 | 771 | - | - | |
Ssu2g3098 | 781 | CDD | B_lectin | 41 | 142 | IPR001480 | - | |
Ssu2g3098 | 781 | SMART | blect_4 | 30 | 142 | IPR001480 | - | |
Ssu2g3098 | 781 | Gene3D | - | 16 | 139 | IPR036426 | - | |
Ssu2g3098 | 781 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 58 | 202 | IPR036426 | - | |
Ssu2g3098 | 781 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 3 | 780 | - | - | |
Ssu2g3098 | 781 | Pfam | Protein kinase domain | 497 | 767 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu2g3098 | 781 | Gene3D | - | 140 | 236 | IPR036426 | - | |
Ssu2g3098 | 781 | ProSitePatterns | Protein kinases ATP-binding region signature. | 499 | 524 | IPR017441 | GO:0005524 | |
Ssu2g3098 | 781 | Pfam | S-locus glycoprotein domain | 239 | 308 | IPR000858 | GO:0048544 | |
Ssu2g3098 | 781 | Gene3D | Transferase(Phosphotransferase) domain 1 | 572 | 775 | - | - | |
Ssu2g3098 | 781 | SMART | serkin_6 | 493 | 769 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu2g3098 | 781 | PIRSF | SRK | 1 | 781 | IPR024171 | GO:0004674 | |
Ssu2g3098 | 781 | Gene3D | Phosphorylase Kinase; domain 1 | 468 | 570 | - | - | |
Ssu2g3098 | 781 | ProSiteProfiles | Protein kinase domain profile. | 493 | 773 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu2g3098 | 781 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 3 | 780 | - | - | |
Ssu2g3098 | 781 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 140 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g3098 | Ssu-Chr2 | 92701328 | 92703673 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g3098 | 402 | 780 | Receptor kinase-like Gene Family | AT1G53430 | 38.918 | 1.47e-67 | 239 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Ssu2g3098 | Pkinase | 4.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g3098 | - | - | gmx:100779807 | 1251.11 |