Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3098 atggcTACCAAAATCCTTGTTCTCTTTGTTGCCTTGCTTCTATGTTCCTATGTTCCAAGGAATGTTAGCTCAATTGAACTGGGGTCCAGCATTGTGGCTGGCACCAATTCATCTTGGCGATCATCCTCTGGTGATTATGCCTTTGGGTTCTACCTCCTTGTTAGTGGCCGCTATCTCGTTGGAATTTGGTTTGATCGGATTCCACAGAAAACACTGGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAATTGGATCAACCATCAATCTCACACAAAGTGGCCAATTTGTGCTCCAACCTGTCAACGGGGCTCCATTTATAATCTACAATGGAACAAACACAACTTCTGCGGTGATGCAGGATGATGGAAATTTCGTCCTGTGGAATTCACTTCCCACCATTATCTGGCAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGACCAAACTTTGAAAATGGGTCAGAAGCTCTTCTCCAATGCCAATGGATCAGTAGACTACTCAACAGGGAAATACAGTTTGGAGATCCAGCAATCTGATGGCAACATTCTTCTTAAAGCTTATCAGTTCACGGATGCTGCTTATTGGTCGACTGGAACTAACCAAAACACAGATGTGAGAATTATTTTTGACAACACAACAGCTTATCTTTACGTGGTCAACGGCAGCGACCAAATTATACATAACTTAACAACTGATGTAACGGGTGCAATCGAAGATTATTATCATCGTGTGCTGATCGATGTCGATGGAAACTTTCAGAAGTCGATTTACCGTAAAGAAAATGGAATGGAGTGGACACCTGTGTGGAAAGCCATACCACAGCCCTGCAGAGTGATTGCACTTTGTGGTGTGTATAGCTTTTGCAATTCATCTGACACCCAACCATACAGTTGTGAGTGCTTGCCTGGCTATACACCTTTGGATCCAAGTGTACCCTCCAAAGGGTGCTATCTCAGTGAGGCCGAGGACTTGTGTGCTGCAAATTCCTCTGCCCCAGACTTTAAGGTGGAAGTGATAGCAATTCAAGATGCTGATATACCAAGCTATGATTACTATTATCTTGATCTACAAGTCATAAATAACATGGATTTGGAAAGCTGCAAGAGGGAACTGATGGATGATTGTCTCTGCATGGCTGCTGTTTTAGATGGCACTGATTGCCATAAGAAAAAGTGGCCAATTATAAATGCCAGAAGAGTCATCCCTGACACTAGCAAATATGTCACGCTGATTAAAGTTCCTCGGCTTGACTATGACACGGACAATGAAGAGGAATCACCGTCTTTGGTTGTTTTGATAGTGGCTCTCATCTCTTGCTCCCTACTTGCTGCATTGTTTGCTGCTACTGCCATTTATCATCACCCCGTTTGTCGGTATCTCATACACAAAAGGGCACCACCAAAGCCTAAGCCAAAGCCTATGGATATCAATCTAAAGGCATTTTCATTCCAACAGCTGAGTGAAGCAACAAATAGATTCAGGGACAAACTTGGTCGAGGTGCCTATGGTACGGTGTACAGTGGGATTTTAAACTTGGAGGGTCAAGAAGTTGAGGTTGCTGTCAAACAACTGGAGCATGTAGAAGACCAAGGTGAGAAAGAATTTGTTACAGAAGTTCAAGTTATTGCTCTCACCTATCATAGAAACCTTGTTGGATTATTGGGCTATTGCAATGAGCAGAATCATAGGCTTCTGGTTTATGAGAAAATGGAAAATGGGACACTATCCAACTTCCTTTTTGGAGAAGAGGGTAAACCCAGCTGGGAGAGTAGAGTCAGAATTGTGCTTGAAATTGCAAGAGGCTTATTATATCTGCATGAAGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCACAGAATGTTCTTCTTGACTCTAGCCACACTGCCAAGATTTCAGATTTTGGACTGGCAAAGCTACTCATGAAAGATAAAACTCGAACAAACACCGATGCTAGAGGGACAATGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATCTTATTTTGCAGAAGGCACATCGAGTTGCATCAAATCGAGGATGGAACAACGGGTGATGACCTGATACTCATAGATTGGGTTCTGTATCTGGCAAAAGAAAGCAATTTAAAAACCGCTGTGATTCATGATCTTGAAGCTGAAAGTGATTTCAAGAGGTTTGAAAGAATGACAATGGTTGGATTATGGTGCGTAAGTCCTAATCCAACTCTTCGACCATCTATGAAAATGGTGGTACAGATGTTGGAAGGAAATATAGAAGTGGGTGTTCCACCACTCAACTGA 2346 0.4241 MATKILVLFVALLLCSYVPRNVSSIELGSSIVAGTNSSWRSSSGDYAFGFYLLVSGRYLVGIWFDRIPQKTLVWSANRDNPVEIGSTINLTQSGQFVLQPVNGAPFIIYNGTNTTSAVMQDDGNFVLWNSLPTIIWQSFDSPTDTLLLDQTLKMGQKLFSNANGSVDYSTGKYSLEIQQSDGNILLKAYQFTDAAYWSTGTNQNTDVRIIFDNTTAYLYVVNGSDQIIHNLTTDVTGAIEDYYHRVLIDVDGNFQKSIYRKENGMEWTPVWKAIPQPCRVIALCGVYSFCNSSDTQPYSCECLPGYTPLDPSVPSKGCYLSEAEDLCAANSSAPDFKVEVIAIQDADIPSYDYYYLDLQVINNMDLESCKRELMDDCLCMAAVLDGTDCHKKKWPIINARRVIPDTSKYVTLIKVPRLDYDTDNEEESPSLVVLIVALISCSLLAALFAATAIYHHPVCRYLIHKRAPPKPKPKPMDINLKAFSFQQLSEATNRFRDKLGRGAYGTVYSGILNLEGQEVEVAVKQLEHVEDQGEKEFVTEVQVIALTYHRNLVGLLGYCNEQNHRLLVYEKMENGTLSNFLFGEEGKPSWESRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSHTAKISDFGLAKLLMKDKTRTNTDARGTMGYMAPEWLKNAPVTTKVDIYSFGVMLLEILFCRRHIELHQIEDGTTGDDLILIDWVLYLAKESNLKTAVIHDLEAESDFKRFERMTMVGLWCVSPNPTLRPSMKMVVQMLEGNIEVGVPPLN 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3098 781 Pfam D-mannose binding lectin 71 155 IPR001480 -
Ssu2g3098 781 SUPERFAMILY Protein kinase-like (PK-like) 471 770 IPR011009 -
Ssu2g3098 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Ssu2g3098 781 CDD STKc_IRAK 499 771 - -
Ssu2g3098 781 CDD B_lectin 41 142 IPR001480 -
Ssu2g3098 781 SMART blect_4 30 142 IPR001480 -
Ssu2g3098 781 Gene3D - 16 139 IPR036426 -
Ssu2g3098 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 202 IPR036426 -
Ssu2g3098 781 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 780 - -
Ssu2g3098 781 Pfam Protein kinase domain 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3098 781 Gene3D - 140 236 IPR036426 -
Ssu2g3098 781 ProSitePatterns Protein kinases ATP-binding region signature. 499 524 IPR017441 GO:0005524
Ssu2g3098 781 Pfam S-locus glycoprotein domain 239 308 IPR000858 GO:0048544
Ssu2g3098 781 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Ssu2g3098 781 SMART serkin_6 493 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3098 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Ssu2g3098 781 Gene3D Phosphorylase Kinase; domain 1 468 570 - -
Ssu2g3098 781 ProSiteProfiles Protein kinase domain profile. 493 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g3098 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 780 - -
Ssu2g3098 781 ProSiteProfiles Bulb-type lectin domain profile. 24 140 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3098 Ssu-Chr2 92701328 92703673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3098 402 780 Receptor kinase-like Gene Family AT1G53430 38.918 1.47e-67 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu2g3098 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3098 - - gmx:100779807 1251.11