Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3088 ATGGATTTTGTAAGTTGCGTAGTACTCCTTGTGTTGGCCTCCACCACCATTCATGTTGTAGGCTCATTCCTAGGAAGAAGAAGCAGAAAACCAAACTACAAACTTCCACCCGGACCCTCTCCTCTTCCCATCATAGGAAACCTTCTTGAACTGGGTAACAAGCCCCACCAGTCATTAGCCAAGCTTGCAAAGATACATGGCCCTTTAATGAGCCTAAAGCTGGGCCAAATAACCACCGTAGTGGTGTCTTCAGCTGAAATGGCCAAAGAGGTGCTCTTAACTCATGACCACTTGTTGTCAAACCGAACCATTCCCCAATCTGTGTCTGTTCTGAACCACGAGAACTATAGCCTTGCCTTCATTCCCGTTTCCACTCTTTGGCGAGACTTGAGGAAAATATGCAATGGCCAGTTGTTTGCACGCAACACTCTAGATGCCAGCCAAGATGTTAGGCGTAAGAAAGTGCAACAACTCCTCGCTGAAATCCATCAAAGCTGCCAAATCGGTGAAGCAGTTGATATTGGAACGGCGGTCTTCAAGACTACAATCAACTTATTATCAAACACCATTTTCTCTGTGGATTTGATTCAATCCGCAGGCACAGCGGGAGAGTTCAAGGACTTGGTCACCAACATCACAAAACTGGTTGGAACACCAAACTTGGCTGATTATTTTCCTATCTTGAAGACGCTTGATCCGCAAGGCATTAAAAGACGTCAGACCAAGAATGTTGAGAAGGTGTTGGACATTTTCGACGGCTTGGTTGAGCAACGGTTGAAGCAAAGGGAAGGCACAGATGTGGACTACGTTCACAAAGACATGTTAGACGCTCTTCTCAACATTTCTCGGGAGAACGAGATGATGGACAAAACAATGATTCAACATTTGTCGCATTCACACTTCACATCATCCCCTCCCCACTCTCTCCGACTCACACACACTGCTTCGCCACTCTTCAAACCCCGACCCCTCTCTTCCATTGGAATCTCGCCGCTCCCGGAGAGGCGCCGGACGCCGGTGGCCGCCGCCGTAGAGGAAAGCCAAGAGAGTTCTGAACCCGAACCCGAGCCCGAACCGGAAGTGGAAGCGGGGTCGAAAGCGGAGTTGGCATCGGAACTGAAGAAGGCGATGGCGGAgaggaaggagaaagaagaggagAACTTGCTGAGTGGAGTGGCGCGTGAGATCGACGAGATTGAATGGCCCGCGTTTGGAAAGGTATTGGGTACAACCGGCGTTGTCGTCAGCGTCATCCTTGGTTCCAGCGTCGTTTTGCTCACCGTCAATGCCGTTTTGGCCGAGCTTTCTGATCGGGTTTTTGCTGGCAAAGGGATTCAGGATTTCTTCACCTGA 1353 0.4878 MDFVSCVVLLVLASTTIHVVGSFLGRRSRKPNYKLPPGPSPLPIIGNLLELGNKPHQSLAKLAKIHGPLMSLKLGQITTVVVSSAEMAKEVLLTHDHLLSNRTIPQSVSVLNHENYSLAFIPVSTLWRDLRKICNGQLFARNTLDASQDVRRKKVQQLLAEIHQSCQIGEAVDIGTAVFKTTINLLSNTIFSVDLIQSAGTAGEFKDLVTNITKLVGTPNLADYFPILKTLDPQGIKRRQTKNVEKVLDIFDGLVEQRLKQREGTDVDYVHKDMLDALLNISRENEMMDKTMIQHLSHSHFTSSPPHSLRLTHTASPLFKPRPLSSIGISPLPERRRTPVAAAVEESQESSEPEPEPEPEVEAGSKAELASELKKAMAERKEKEEENLLSGVAREIDEIEWPAFGKVLGTTGVVVSVILGSSVVLLTVNAVLAELSDRVFAGKGIQDFFT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3088 450 MobiDBLite consensus disorder prediction 297 367 - -
Ssu2g3088 450 Coils Coil 366 387 - -
Ssu2g3088 450 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 302 - -
Ssu2g3088 450 SUPERFAMILY Cytochrome P450 36 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g3088 450 MobiDBLite consensus disorder prediction 297 311 - -
Ssu2g3088 450 Gene3D Cytochrome P450 25 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g3088 450 Pfam Cytochrome P450 36 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g3088 450 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3088 Ssu-Chr2 92587598 92591645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3088 34 296 Cytochrome P450 AT3G61040 41.729 2.33e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3088 - K23810 gmx:100798291 418.698