LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu2g3088	ATGGATTTTGTAAGTTGCGTAGTACTCCTTGTGTTGGCCTCCACCACCATTCATGTTGTAGGCTCATTCCTAGGAAGAAGAAGCAGAAAACCAAACTACAAACTTCCACCCGGACCCTCTCCTCTTCCCATCATAGGAAACCTTCTTGAACTGGGTAACAAGCCCCACCAGTCATTAGCCAAGCTTGCAAAGATACATGGCCCTTTAATGAGCCTAAAGCTGGGCCAAATAACCACCGTAGTGGTGTCTTCAGCTGAAATGGCCAAAGAGGTGCTCTTAACTCATGACCACTTGTTGTCAAACCGAACCATTCCCCAATCTGTGTCTGTTCTGAACCACGAGAACTATAGCCTTGCCTTCATTCCCGTTTCCACTCTTTGGCGAGACTTGAGGAAAATATGCAATGGCCAGTTGTTTGCACGCAACACTCTAGATGCCAGCCAAGATGTTAGGCGTAAGAAAGTGCAACAACTCCTCGCTGAAATCCATCAAAGCTGCCAAATCGGTGAAGCAGTTGATATTGGAACGGCGGTCTTCAAGACTACAATCAACTTATTATCAAACACCATTTTCTCTGTGGATTTGATTCAATCCGCAGGCACAGCGGGAGAGTTCAAGGACTTGGTCACCAACATCACAAAACTGGTTGGAACACCAAACTTGGCTGATTATTTTCCTATCTTGAAGACGCTTGATCCGCAAGGCATTAAAAGACGTCAGACCAAGAATGTTGAGAAGGTGTTGGACATTTTCGACGGCTTGGTTGAGCAACGGTTGAAGCAAAGGGAAGGCACAGATGTGGACTACGTTCACAAAGACATGTTAGACGCTCTTCTCAACATTTCTCGGGAGAACGAGATGATGGACAAAACAATGATTCAACATTTGTCGCATTCACACTTCACATCATCCCCTCCCCACTCTCTCCGACTCACACACACTGCTTCGCCACTCTTCAAACCCCGACCCCTCTCTTCCATTGGAATCTCGCCGCTCCCGGAGAGGCGCCGGACGCCGGTGGCCGCCGCCGTAGAGGAAAGCCAAGAGAGTTCTGAACCCGAACCCGAGCCCGAACCGGAAGTGGAAGCGGGGTCGAAAGCGGAGTTGGCATCGGAACTGAAGAAGGCGATGGCGGAgaggaaggagaaagaagaggagAACTTGCTGAGTGGAGTGGCGCGTGAGATCGACGAGATTGAATGGCCCGCGTTTGGAAAGGTATTGGGTACAACCGGCGTTGTCGTCAGCGTCATCCTTGGTTCCAGCGTCGTTTTGCTCACCGTCAATGCCGTTTTGGCCGAGCTTTCTGATCGGGTTTTTGCTGGCAAAGGGATTCAGGATTTCTTCACCTGA	1353	0.4878	MDFVSCVVLLVLASTTIHVVGSFLGRRSRKPNYKLPPGPSPLPIIGNLLELGNKPHQSLAKLAKIHGPLMSLKLGQITTVVVSSAEMAKEVLLTHDHLLSNRTIPQSVSVLNHENYSLAFIPVSTLWRDLRKICNGQLFARNTLDASQDVRRKKVQQLLAEIHQSCQIGEAVDIGTAVFKTTINLLSNTIFSVDLIQSAGTAGEFKDLVTNITKLVGTPNLADYFPILKTLDPQGIKRRQTKNVEKVLDIFDGLVEQRLKQREGTDVDYVHKDMLDALLNISRENEMMDKTMIQHLSHSHFTSSPPHSLRLTHTASPLFKPRPLSSIGISPLPERRRTPVAAAVEESQESSEPEPEPEPEVEAGSKAELASELKKAMAERKEKEEENLLSGVAREIDEIEWPAFGKVLGTTGVVVSVILGSSVVLLTVNAVLAELSDRVFAGKGIQDFFT	450

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu2g3088	450	MobiDBLite	consensus disorder prediction	297	367	-	-
	Ssu2g3088	450	Coils	Coil	366	387	-	-
	Ssu2g3088	450	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	1	302	-	-
	Ssu2g3088	450	SUPERFAMILY	Cytochrome P450	36	291	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ssu2g3088	450	MobiDBLite	consensus disorder prediction	297	311	-	-
	Ssu2g3088	450	Gene3D	Cytochrome P450	25	304	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ssu2g3088	450	Pfam	Cytochrome P450	36	295	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ssu2g3088	450	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	1	302	-	-

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu2g3088	Ssu-Chr2	92587598	92591645	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu2g3088	34	296	Cytochrome P450	AT3G61040	41.729	2.33e-62	205

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu2g3088	-		K23810	gmx:100798291	418.698

Showing 1 to 1 of 1 entries