Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3079 ATGGATCACTCTCGAATCTCTCTTCGACCATTCAAGGCATCTGATGCGGACGACTTTCTTAAATGGGGTGGTGACGATAGAGTTACACGGTACCTGAGATGGAACTCCATCACATCCAAAGAAGAAGCTTTGGCCTATATAGAGAAGGTTGCGATGCCCCACCCATGGCGTCAATCGATATGCTTGGATGACTGCTCCATTGGATACGTCTCCGTGAAGCCGGAATCGGGTGATTACCGGTGCAAGGCGCATGTTAGTTACGCTGTGGCTGCGGAGTATTGGGGACAAGGGATAGTTACGGAGGCTCTGAGGAGGGCAATACCCACCGTCTTCAAACAATTCCCGGAGGTGCTGAGACTTGAGGCTTTGGTGGAGGTGGAGAATAAGGGGTCTCAACGGGTGCTGCACAAAGTTGGTTTTGTCATGGAAGGGACGCTTAGGAAGTATGCATTTTGTAAAGGGGACATCAAGGATTTCCTTATCTTCAGCTTCTTGGCCACAGATGAACTAAGGTGA 516 0.4981 MDHSRISLRPFKASDADDFLKWGGDDRVTRYLRWNSITSKEEALAYIEKVAMPHPWRQSICLDDCSIGYVSVKPESGDYRCKAHVSYAVAAEYWGQGIVTEALRRAIPTVFKQFPEVLRLEALVEVENKGSQRVLHKVGFVMEGTLRKYAFCKGDIKDFLIFSFLATDELR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3079 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 168 - -
Ssu2g3079 171 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 165 IPR016181 -
Ssu2g3079 171 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 167 IPR000182 GO:0016407
Ssu2g3079 171 Gene3D - 1 169 - -
Ssu2g3079 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 168 - -
Ssu2g3079 171 Pfam Acetyltransferase (GNAT) domain 5 140 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3079 Ssu-Chr2 92482734 92483249 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu2g3079 Acetyltransf_3 2.7e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3079 - - gmx:100809953 320.857