Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2976 ATGGGGTGCATATGCTCAAAAGACTCAAACAAAGACAAAGTTGATGaatatgagaaagaaaaagagttgtACAAGTCTTCAGTACAGTTGGTTGCTCCTGCTGTCTCAACTGCACAGTTAGATGGTGGTAGCATTGATGGTTCGGTGCCCCGAATGGCCAAGTCATCATCAACGGTGATTAGAGGGCCTGGCAAAGTGCCATCCGAGGATAAAAGCAACCACTTAGATGCCACAAAAAGCCAGCACCAGAGGTGCATGACAATGAGTGCTGGTTTAGGTGAAAGAAAGCCACTAATGAGTAGAATACTTAGCGTGCAACACTGTGCAGGAGAACATGTTGATGCTGGATGGCCATTGTGGTTATCTTCAGTGGCAGCAGAAGCCATTAAAGGGTGGGAACCTCGACGGGCAGactcttttgaaaaattagaccAATTCTTCACTACAAACCCCTTACCTTGTGATCCCTTAAGTTTACCAAAGTTTTCACCAAGCAAGGAGTTTGATGCCAAGCGTCGAGAAAAGGAAGCTACAAGGAAAAATGCGGAAGCTGTTAAAGGACGTGGACCGGCATCTGTTTTTAGGGGAGCAGGAGATACCAAAGTACCGGAAACACCAGAGTATAATGCTCAGGGAAATATATCTATACGGGACAAGTCAAATACTAGAATGTCCCGTCTTAGATATCAATCTCAGGAGGATGGTGGGTCTGACGACAATGACGAACCAACCAGAGTATATCTACAGAATGGCCATACACATTCTACTTCATTGATGCACAGCAGTATAGCAGGACCATCCTCATTGAGTAAGAGACAAGAATCATCTAGGATGAATCCAGAATTACGGACACAGAGGTCTCATATGAATCATGCAGCAGCAGATTTATCTACCTCTTCCGTTAAAAAGGAGCAAAGCAAGTCTGGTCGTGAACCCGGGATGGGTTATATACCAAAGAAAAATAGGATCCACTGCTCTGGACCGTTGATGCCTCCGGGTGGCAACATTGATGACATGCTGAGAGAGCATGAGCGATTAATGCAAGATGTTTTTCGTAGTGTCAAAAAGTCCAATCCGTAG 1080 0.4352 MGCICSKDSNKDKVDEYEKEKELYKSSVQLVAPAVSTAQLDGGSIDGSVPRMAKSSSTVIRGPGKVPSEDKSNHLDATKSQHQRCMTMSAGLGERKPLMSRILSVQHCAGEHVDAGWPLWLSSVAAEAIKGWEPRRADSFEKLDQFFTTNPLPCDPLSLPKFSPSKEFDAKRREKEATRKNAEAVKGRGPASVFRGAGDTKVPETPEYNAQGNISIRDKSNTRMSRLRYQSQEDGGSDDNDEPTRVYLQNGHTHSTSLMHSSIAGPSSLSKRQESSRMNPELRTQRSHMNHAAADLSTSSVKKEQSKSGREPGMGYIPKKNRIHCSGPLMPPGGNIDDMLREHERLMQDVFRSVKKSNP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2976 359 MobiDBLite consensus disorder prediction 206 224 - -
Ssu2g2976 359 Coils Coil 7 27 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 154 224 - -
Ssu2g2976 359 PANTHER CELL DIVISION PROTEIN KINASE 145 355 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 165 183 - -
Ssu2g2976 359 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 63 145 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 41 83 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 254 275 - -
Ssu2g2976 359 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 145 355 - -
Ssu2g2976 359 PANTHER CELL DIVISION PROTEIN KINASE 63 145 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 254 335 - -
Ssu2g2976 359 MobiDBLite consensus disorder prediction 282 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2976 Ssu-Chr2 91318512 91323690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2976 135 186 Core Cell Cycle Gene Families AT5G10270 43.396 6.83e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2976 K08819 - gmx:100791743 302.367