Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2962 ATGGTTCACTCCCTCATCTTCTCATCTCATGTTTGCACTTCCCAGTTCCCACTACCACGCACTACCGCTCTCACATGTACAGCTGTACCAATTTGCCCACCATATTTTCAGACCGAACTCCACACTCGCAGCTTCCAACACACCACTATGACTGCCACTACCTCAACCCCCCTCTCTACCGTCACCGACGCCAATCTTCACACCAGATTTCATTCTCGTTTTATGTCTTTCACTCTCACCTCAGCCGCCTCACATTTCCCACTTCCTGTTCATATTCGCACTCCTCACGCCAAACGAATTTCTTCAATCAGATGCCAATCAATTAATACCGATAAGAAGAAATCAAGTAGAAATATGCTGGACAACGCAAGTAACCTCCTTACGAACTTGTTAAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGTGCAGTCTCAGATCTGTTTGGTCGACCTCTCTTTTTCTCACTATATGATTGGTTCTTGGAGCATGGCTCGGTGTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCTAGACATATTCTGCGAGAAAATGCTTTTTCTTATGACAAGggAGTACTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCGGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCGGCTTTCCATAACTCATACTTGGAAGCTATGGTCAAAATATTCACAACTTGTTCAGAAAGAACGATATTGAAGGTTAATAAGCTTCTCGAAGGAGAGGGTTAtgatggtcctaactcaattgAATTGGATCTTGAGGCAGAGTTTTCTAGTTTGGCTCTTGATATTATTGGGCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTACGGCACTCTTTTTGAAGCCGAACATAGATCCACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCAAGGCAAAGAAGGTTTCAGGATGACCTAAAGATCATCAATACTTGTCTTGACAGACTTATCAGAAATGCAAAAGAGAGCAGACAGGAAACAGATGTTGAGAAATTGCAGCAGAGGGATTACTTAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGCTGATGTTGATGATTGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAAACAACGGCTGCAGTTCTTACTTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTATGAGGAGGCCAACTTTTGAATCACTTAAAGAATTGCAGTACATTAGATTGATTGTTGTTGAGGCTCTTCGTTTATACCCCCAACCACCTTTGCTGATTAGACGTGCACTCAAATCTGATGTTTTACCAGGTGGGCACAAAGGTGATAAAGATGGTTATGCAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACCGCCCGCATGACTTCGAACCAGAAAGATTTCTAGTGCAAAGCAAGAATGAAGAAATTGAAGGATGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCGAACGAGATTATATCGGATTTTGCTTTCTTGCCTTTTGGTGGCGGACCACGAAAGTGTGTTGGGGACCAATTTGCTCTGATGGAGGCCACTGTAGCGTTGACTATGCTGCTTCAGAATTTTGACGTGGAATTGAAGGGGACCCCTGAATCGGTGGAACTAGTTACTGGGGCAACTATCCATACCAAAAATGGAATGTGGTGCAAATTGAGGAAGAGATCTAATTTACATTAA 1911 0.4254 MVHSLIFSSHVCTSQFPLPRTTALTCTAVPICPPYFQTELHTRSFQHTTMTATTSTPLSTVTDANLHTRFHSRFMSFTLTSAASHFPLPVHIRTPHAKRISSIRCQSINTDKKKSSRNMLDNASNLLTNLLSGGSIGSMPIAEGAVSDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMVKIFTTCSERTILKVNKLLEGEGYDGPNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRRFQDDLKIINTCLDRLIRNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDCQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGMRRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRALKSDVLPGGHKGDKDGYAIPAGTDVFISVYNLHRSPYFWDRPHDFEPERFLVQSKNEEIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMEATVALTMLLQNFDVELKGTPESVELVTGATIHTKNGMWCKLRKRSNLH 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2962 636 PRINTS E-class P450 group I signature 569 579 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS E-class P450 group I signature 162 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS E-class P450 group I signature 422 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS E-class P450 group I signature 579 602 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS E-class P450 group I signature 402 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 SUPERFAMILY Cytochrome P450 150 632 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PANTHER CYTOCHROME P450 FAMILY 4 134 632 - -
Ssu2g2962 636 PRINTS P450 superfamily signature 570 579 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS P450 superfamily signature 413 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS P450 superfamily signature 579 590 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 134 632 - -
Ssu2g2962 636 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 572 581 IPR017972 GO:0005506|GO:0016705
Ssu2g2962 636 Pfam Cytochrome P450 162 627 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2962 636 Gene3D Cytochrome P450 138 636 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2962 Ssu-Chr2 91108192 91117664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2962 89 634 Cytochrome P450 AT4G15110 78.832 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2962 K24543 - gmx:606504 1056.59