Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2925 ATGGAACAGTTCCGGCATATCGGAGAGGTAGTTGGGAGTCTGAAAGCGCTTATGGTTTTGCGCGACGAAATTCAAATCAACCAACGCCAATGCTGTTTGATCCTGGACATCTTCAGTTTGGCGATGGACACGATTGCGGAGGAGATACGGCAGAACCTGAAGCTGGAGGAGCGGAACACGAAATGGAAGCCTCTAGAATTTCCACTAAAAGAGCTATGCAGGGTTTTCAAGGAAGGAGAGCTTTACATAAGGCAGTGTTTGGATTCCAAGGACTGGTTGGGGAAAGCCATCACCCTCTCTCACAACCGAGACTGTGTCGAATTCCACATCCATAATTTGCTCTGCTATTTCCCCGCGGTCATCGAGGCCATCGAGGATGCGGGGGAGATCTCAGGCTTGGATCCGGACGAGAAGGGGAAGAAGAAAGTCATGCTGGCTCGGAAGTATGACGCGGAATGGAACGACCCGAAGCTGTTCCAATGGAGGTTCGGGAAACAATATTTGGTCCCGCGCGAGATTTGCGAGCAGTTGGAGAACGCGTGGAGGGAGGACAGGTGGAGGCTCATTGAAGCAATCAAGGACAAGACTCAAAAGAAGGGTTCTGGTTCTGCCGCCGCCAAAGTCGCGTTTACGAAGAGCGAGCAGCGCCTCGCAGACATGATGCTCAAGAAACTGCTTAATGGGTCGGAGATCGGCCCCACTGCGGTCCTAGTTGGGTCCAAGGATTACCAAGTAAGACGCAGGTTGGGCCGCGGGAGGGAGTTTAAGGAAATCCAATGGCTCGGACACAGCTTCGCGTTGCGGCACTTTCAAGGGGATAGAAAGGCGCACGAGGCTGAGGTTTCAACTCTCTTGTCGCTTTCTCACCCCAACATATTGCAATACCTCTGCGAGTTTTAcgatgaagagaaaaaagagttcTCTCTTATAATGGAGTTGATGAACAAGGATTTATGGACTTATATGAAAGAGAACTGTGGTCCGAGGAGACAGATTCTGTTCTCTGTCCCCGTTGTGGTGGATCTCATGCTTCAGATAGCCAGAGGCATGGAGTACCTACACTCAAAAAAGATTTGTCACGGACACCTTAACCCTTGTAATATTTTGCTAAGGGCGAGGAACTCCCAAGAGGGTTGTTttcaagcaaaggtttcaggTTTCGGGCTGTCTTCTTTGCACAATGGGGACGCTAATGAGGACGTCAACCCTTTAACTTGGTATGCTCCTGAAGTTCTGACAGAGTTAGAACAAACGGGGAATGCTTATACTTCCACCTCGGAGAAAGCCGACGCCTACAGCTTTGGAATGATATGCTTCGAGTTGTTGACAGGGAAAGTGCCTTTTGAAGATAACCACCTTCAAGGAGACAGGACCAGCCAAAACATTAAGGCGGGGGAGAGACCTTTGTTTCCTTACCGTTCCCCGAAGTACCTTGTGAGTTTGATAAAAAAGTGCTGGCAAACGGACCCTGCTCAGCGTCCTACTTTCTCCTCCATTTGTAGGATTTTGCGGTACACAAAAAAGTTACTTGCCATGAGCACAGAGTACCACGTCATCAACCCTGAAAGCAACCAGCTTGAACTGCTGGCCCAGCCTGTTGATTGCTGCGACATAGAAGCAACGTTCCTCAAGAGCTTTCCAATGGAGATGGCATCTGGTGTGTCCGCTGTGTCACAGATACCGTACGAAATGTTTGCTTATAAAGTTGCAGAGAAAGGGAAAATGAGTTCGAACAATACTAAAGATAAGTGCTGCGACTGCGAGCCCTCCAAGGATGAGCCCTCCGGGTGTAGGAGTGAAAATGATGACCAGAACACAGTGTGTGGTGATGATAACGCATCCACAGTGGAAGATCCGCTCCCACTAGTAACCTATCCAACATCAGTTTGTGGTGACACGCGGTCTGTTTGCTCTGAAGCCCCGTTCAGGAAAACTGTTAGAATAAAGAAACCAACACAAGTAAAGGCCAAGAAAGAACAAGGAACGTCAAAATTGCGAGTGACAAAATCATTACCGTCATCTTTCTCTAGTCGAGTTTTAAGGACAACTAAAGCGAATCAGCCGTCGTTGGCACCAAGCACTTTGAGCCCTGGTAGAAGACGACCTCCCCTGGTCTCTGAATCGGGGCGCAACTCCAAAGGCAATCAATCACCATTAGTATCGATTCCTTCTAGCTCagttaggagaaaaaaaagtgagggCAGTTTGTCAGATTCTAAGTCCAGTTTAAAGCTGAGAAAAAGGGACCAGTCACCATTAACTAGATACGGCAGCGCCACAGATTGTTTGAAGATGAAAAAGTCACAACTGACGTTGAACCCTTCTTTGAGCCCTGGAAGACTAAGACGTGCCAACATTGAGAACAATTTGAAGGGGCTCACGCCAACCCATGAGTTGAGCACTTCGAGACCATGCACAAGCAAAAGACGTGGTGGCCATGTCTCAGATTTGGATAGCGTTTTAAAGAAGACAACAGGCAGGTTGTCATCGTTGGCACTGAGTCCCTTAAGCCCTTatgtgagaagaaaaaaaacatgcGGCCATGTCTCTGACTCCGATAGTAGTTTTGTGAAGAACAGAGGAAGCTTGTCCCCATTCGCATTGAGCCCTTTGAGTCCGTATGTGAGGACAACTTGTGGCCATGTCTCGGATTAA 2655 0.4708 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMDTIAEEIRQNLKLEERNTKWKPLEFPLKELCRVFKEGELYIRQCLDSKDWLGKAITLSHNRDCVEFHIHNLLCYFPAVIEAIEDAGEISGLDPDEKGKKKVMLARKYDAEWNDPKLFQWRFGKQYLVPREICEQLENAWREDRWRLIEAIKDKTQKKGSGSAAAKVAFTKSEQRLADMMLKKLLNGSEIGPTAVLVGSKDYQVRRRLGRGREFKEIQWLGHSFALRHFQGDRKAHEAEVSTLLSLSHPNILQYLCEFYDEEKKEFSLIMELMNKDLWTYMKENCGPRRQILFSVPVVVDLMLQIARGMEYLHSKKICHGHLNPCNILLRARNSQEGCFQAKVSGFGLSSLHNGDANEDVNPLTWYAPEVLTELEQTGNAYTSTSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTSQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKLLAMSTEYHVINPESNQLELLAQPVDCCDIEATFLKSFPMEMASGVSAVSQIPYEMFAYKVAEKGKMSSNNTKDKCCDCEPSKDEPSGCRSENDDQNTVCGDDNASTVEDPLPLVTYPTSVCGDTRSVCSEAPFRKTVRIKKPTQVKAKKEQGTSKLRVTKSLPSSFSSRVLRTTKANQPSLAPSTLSPGRRRPPLVSESGRNSKGNQSPLVSIPSSSVRRKKSEGSLSDSKSSLKLRKRDQSPLTRYGSATDCLKMKKSQLTLNPSLSPGRLRRANIENNLKGLTPTHELSTSRPCTSKRRGGHVSDLDSVLKKTTGRLSSLALSPLSPYVRRKKTCGHVSDSDSSFVKNRGSLSPFALSPLSPYVRTTCGHVSD 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2925 884 MobiDBLite consensus disorder prediction 576 615 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 788 814 - -
Ssu2g2925 884 Gene3D Transferase(Phosphotransferase) domain 1 239 528 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 789 808 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 731 751 - -
Ssu2g2925 884 Pfam Protein tyrosine and serine/threonine kinase 274 502 IPR001245 GO:0004672|GO:0006468
Ssu2g2925 884 ProSiteProfiles Protein kinase domain profile. 243 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2925 884 SUPERFAMILY Protein kinase-like (PK-like) 241 505 IPR011009 -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 651 760 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 665 694 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 576 599 - -
Ssu2g2925 884 MobiDBLite consensus disorder prediction 708 730 - -
Ssu2g2925 884 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 719 - -
Ssu2g2925 884 PANTHER SERINE-THREONINE PROTEIN KINASE 1 719 - -
Ssu2g2925 884 Pfam Protein of unknown function (DUF1221) 21 240 IPR010632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2925 Ssu-Chr2 90614599 90617930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2925 280 510 MAP Kinase Kinase Kinase AT1G14000 35.391 1.16e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Ssu2g2925 PK_Tyr_Ser-Thr 9.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2925 - - gmx:100778844 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2925 2 90614599 90617930 Ssu2g2925 2 90614599 90617930 ECH