Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2911 ATGGCTTCCAATGCCACATCTCGAAATGCTTGCCCGCCGCCAATGAAAGCCACATCAAACGGCGCGTTTCAGGGTGATAACCCTCTTGATTTTGCGCTTCCCCTGGCTATTCTGCAGATATGCCTTGTTCTTGTAGTCGCGAGGGGACTGGCATATATTATGAAACCTTTAAGGCAACCAAGAGTTATTGCAGAGATTATTGGAGGAATACTTCTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTGAATGCAGTTTTCCCACCCAGGAGTCTTACAGTATTGGATACACTAGCAAACATGGGCCTTATATTCTTCCTATTCTTAGCAGGCCTGGAGTTAGATCTTAAATCTCTGCATCGATCTGGAAAGCGAGTCATTGCTATTGCTCTGGCTGGAATAAGCCTACCTTTTGCACTAGGAATTGGTTCATCATTTGTTCTGCAACAAACAATTGCCAAAGGTGCAGACACTACCACATTCCTTGTATTTATGGGTGTTGCTCTGTCCATAACTGCATTTCCTGTATTGGCCCGTATTTTGGCTGAGTTGAAACTTCTAACCACAAATGTTGGCAGAGTAGCTTTGTCAGCTGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTGGCTATTGCCTTGTCAGGCCATGACCGATCTCCACTTGTGTCATTGTGGGTCTTCTTAGCTGGGTGTGGTTTTGTCATTTGTGCTATCCTTATTATCCCTCCAATTTTCAAATGGATGAGCCAACAATGCCATGAAGGTGAACCAGTTGAAGAGGTACGTTAG 801 0.4469 MASNATSRNACPPPMKATSNGAFQGDNPLDFALPLAILQICLVLVVARGLAYIMKPLRQPRVIAEIIGGILLGPSALGRNKSYLNAVFPPRSLTVLDTLANMGLIFFLFLAGLELDLKSLHRSGKRVIAIALAGISLPFALGIGSSFVLQQTIAKGADTTTFLVFMGVALSITAFPVLARILAELKLLTTNVGRVALSAAAINDIAAWILLALAIALSGHDRSPLVSLWVFLAGCGFVICAILIIPPIFKWMSQQCHEGEPVEEVR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2911 266 PANTHER CATION/H(+) ANTIPORTER 18 7 265 - -
Ssu2g2911 266 Pfam Sodium/hydrogen exchanger family 41 254 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu2g2911 266 Gene3D - 35 265 IPR038770 -
Ssu2g2911 266 PANTHER CATION/H + ANTIPORTER 7 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2911 Ssu-Chr2 90434940 90436363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2911 1 264 Antiporter Super Family AT5G41610 75.379 1.02e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2911 - - gmx:100810155 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2911 2 90434940 90436363 Ssu2g2911 2 90434940 90436363 ECH