Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2910 ATGGGGTCTTCtggtttttgttatatttacaGCTTCTTTTGGAAGATTGTTGGGACTCTTGTTGTTTCTCTTTTATGCAAATTACCTTTTAATGAGGCTTTGGTGTTGGCGTTCTTGATGAATTGTAAAGGCTTGGTTGAATTAATAGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCTGTCTTTACTACTTTCATCACCACTCCTCTTGTGACTGCTGTGTATAAGCCTGCAAGGAAGGGAAGAATAGCTGATTACAAATATAGAacaattgaaaggaaaaatgcAAATAGCCAACTGAGGATTCTTGCCTGCTTCCATGGTTCAAGAAATATTCCATCaatgataaatttgattgagGCTTCAAGAGGAATCCAGAAGCGTGATGCACTTTGTGTTTATGCAATGCACCTTAAGGAATTGTCTGAGAGGTCCTCATCTATACTAATGGTACATAAGGCAAGAAGAAATGGGTTGCCATTCTGGAACAAAGGCCATCATGCAGATTCTAACCATGTTATTGTGGCATTTGAGGCTTACAGGCAACTAAGCCAAGTGTCTATCCGGCCAATGATCGCAATCTCATCTATGACTAACATGCATGAAGACATTTGTACAACTGCGGAGAGGAAGGGTGCCGCAGTCATTATTCTTCCATTTCATAAGCATCAAAGATTGGATGGTTCACTAAATATTACTAGAAATGATTTTCGATGGGTTAACAAAAGGGTACTTGAGCATGCATCATGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGTGGTACATCCCATGTCTCTGCAAGTAATGTTTCTTATCGGGTTACAGTGCTTTTctttggtggtggtgatgattgTGAAGCCCTTGCTTATGGAGGTCGTATGGCTGAGCACCCTGGCATTGGATTGGTGGTTATCCGCTTTGTAGTGGAACCAATGAATGAAGGAGAGATTGTAAGAGTTGATGTGGGTGATTCCTCTAGCACCAAATTAATCTCACAGGATGAGGAATTCCTCAATGAATTTAAGGCGAAAATAGCCAATGATGACTCCATCATCTATGAAgagaaaatagtaaataatgcTGCAGAAACAGTTGCTATTATCCGTGAGTTTAATAGCTGCAATCTGTTTCTTGTGGGTTCAAGGCCAGCCGGTGAAGTTGCCTGTGCTCTGAAAAAATGTGAATGCCCTGAGCTAGGACCTGTTGGTGGTTTGTTGTCATCACAAGATTACCCAACAACAGCATCCGTTTTGGTGATGCAACAGTATCACAATGGGGAGCCAATAAACTTTATCTCAGAATTGGAGGAACACTTACCTGATAGCTCAGAATCTGCATAA 1380 0.3855 MGSSGFCYIYSFFWKIVGTLVVSLLCKLPFNEALVLAFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVTAVYKPARKGRIADYKYRTIERKNANSQLRILACFHGSRNIPSMINLIEASRGIQKRDALCVYAMHLKELSERSSSILMVHKARRNGLPFWNKGHHADSNHVIVAFEAYRQLSQVSIRPMIAISSMTNMHEDICTTAERKGAAVIILPFHKHQRLDGSLNITRNDFRWVNKRVLEHASCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDCEALAYGGRMAEHPGIGLVVIRFVVEPMNEGEIVRVDVGDSSSTKLISQDEEFLNEFKAKIANDDSIIYEEKIVNNAAETVAIIREFNSCNLFLVGSRPAGEVACALKKCECPELGPVGGLLSSQDYPTTASVLVMQQYHNGEPINFISELEEHLPDSSESA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2910 459 PANTHER CATION/H(+) ANTIPORTER 18 11 449 - -
Ssu2g2910 459 Gene3D - 4 96 IPR038770 -
Ssu2g2910 459 Pfam Sodium/hydrogen exchanger family 11 84 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu2g2910 459 PANTHER CATION/H + ANTIPORTER 11 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2910 Ssu-Chr2 90433245 90434725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2910 13 438 Antiporter Super Family AT5G41610 64.286 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2910 - - gmx:100810155 793.112