Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2886 ATGGGTAGCAAAGAGCAAGAGTCAATTAAGAAGGTTATGACTCACGGAGGTCGATACGTGCAGTACAATGTGTACGGAAACTTGTTCGAGGTCTCCTCCAAGTATGTCCCTCCCATTCGCCCTATCGGTAGAGGCGCATACGGCATCGTTTGtgCTGCCGTTAATTCCGATACGCACGAGGAAGTTGCCGTAAAAAAGATTGGTAACGCATTTGACAACATCATTGACGCAAAACGGACTTTGAGGGAAATTAAGCTCCTTCGCCACATGGACCATGAAAATATCATTGCCATTAAGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCACGTTATTCGTTCTGACCAACCTCTTAATGATGACCATTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATGTCTTACACCGTGATCTTAAGCCCAGTAATTTGCTTCTGAATGCAAACTGTGACCTTAAAATTGGAGACTTTGGTTTGGCAAGGACAACATCTGAAACGAATTTCATGACCGAGTATGTTGTCACCCGATGGTACCGTGCCCCGGAGTTGCTCCTTAATTGTTCAGAGTACACCTCTGCGATTGATGTTTGGTCTGTTGGTTGCATATTTGCTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCATCAACTAAGGCTTATAACAGAGttaataGGTTCACCTGACGATGCCAACCTTGGATTTCTCCAAAGTGAAAATGCCAGAAGATATGTTCGACAGCTTCCACAATATAGGAAGCAAAATTTCTTGGCTAGATTCCCAAATATGTCTCCTGAGGCTTTGGATCTACTAGAAAAGATGCTTGTCTTTGATCCCAACAAACGTATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCATCACTTCATGACGTCAATGATGAACCAGTTGGTCCTGGgcaattcaattttgattttgagcAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGGGGGAATCAGTGAAGTACAATCCAGATCCACCCTGGCTAAACTGA 1116 0.4211 MGSKEQESIKKVMTHGGRYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEEVAVKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRKDAFNDVYIVYELMDTDLHHVIRSDQPLNDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETNFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFAEIMTREPLFPGKDYVHQLRLITELIGSPDDANLGFLQSENARRYVRQLPQYRKQNFLARFPNMSPEALDLLEKMLVFDPNKRITVDEALCHPYLSSLHDVNDEPVGPGQFNFDFEQPTCTEEHIKELIWGESVKYNPDPPWLN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2886 371 ProSiteProfiles Protein kinase domain profile. 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2886 371 ProSitePatterns MAP kinase signature. 71 174 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ssu2g2886 371 Gene3D Phosphorylase Kinase; domain 1 19 358 - -
Ssu2g2886 371 Pfam Protein kinase domain 40 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2886 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 369 - -
Ssu2g2886 371 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524
Ssu2g2886 371 SMART serkin_6 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2886 371 Gene3D Transferase(Phosphotransferase) domain 1 120 349 - -
Ssu2g2886 371 CDD STKc_TEY_MAPK 29 365 - -
Ssu2g2886 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Ssu2g2886 371 SUPERFAMILY Protein kinase-like (PK-like) 39 330 IPR011009 -
Ssu2g2886 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2886 Ssu-Chr2 90093066 90096291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2886 2 365 MAP Kinase Gene Family AT4G01370 82.967 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ssu2g2886 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2886 - - gmx:100803024 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2886 2 90093066 90096291 Ssu2g2886 2 90093066 90096291 ECH
Ssu2g2886 2 90093066 90096291 Ssu5g3089 5 78625928 78628656 PCT