Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2880 atggcCCGACAAGTGTGTGAAGACAAATTATCACCTGGATTCTGCTACTCTGATACATCATCGGGTAACCCAACGATGCTAGTAAACCAGATCCACCAAGGCTTTGTATCAGACCCGGAGATGTTCAACCTCGGCACAGGCATGGAAATGATAGGGTTTCCAAAGAGTGACACCAACGCCGTCATGTGGAGAAGTTTCATCCCCAAACCGGGTCCTTCCTCTTCCAAAACTATCAACGAGTCTTCAAGCAGTTTCTACCACCACGACTACAATAACAACAAGCCTTCGGATTTCACACCAGGGAATATTTCTGAAACAAGTGCCGAGAATCTAATCGTGGGAGCTCACGATTCAGCCCCGTGGCAAGACAACAACAACAGGTTACTCGTTGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGCCAACGAAAGGCCTAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCCACTATTGGGTTGCAATCTTTTGAGCTAAGACAAACAAGCCATCATCCAGGATTTTGTTTCGTCAAGTTCCAGAGAAGGGTTCTTTGGAAAATCAGGTGA 582 0.4553 MARQVCEDKLSPGFCYSDTSSGNPTMLVNQIHQGFVSDPEMFNLGTGMEMIGFPKSDTNAVMWRSFIPKPGPSSSKTINESSSSFYHHDYNNNKPSDFTPGNISETSAENLIVGAHDSAPWQDNNNRLLVDDSSLRCVFPCEANERPSQGLSLSLSSTNPSTIGLQSFELRQTSHHPGFCFVKFQRRVLWKIR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2880 193 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 11 176 - -
Ssu2g2880 193 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 11 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2880 Ssu-Chr2 90029361 90029942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2880 - - gmx:100803088 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2880 2 90029361 90029942 Ssu5g3084 5 78532627 78535769 PCT
Ssu6g1402 6 22974925 22978204 Ssu2g2880 2 90029361 90029942 PCT