Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2851 ATGAACCCATTGGCAAGAAGTCTCGAGGAGTTGCTACCAGATAGAATCTCAAGTACTTATCGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGTGTCTACAGTTTGTGCTGCTTTTCTGATTCCTTTTTTTGgtTTTGTGATGGCTTTAATTGGCTCTCTCTTTAGTATACTTGTGTCAGTGATATTGCCaagtttatgttttatgaaaattgtgGGAAAAAAAGCAACTTACACACAGGTTTCATTGAGCATCGTAATTGTTGCATTTGGAGTCATTTGTGGAGTTCTTGGAACATATTCGTCTGTGCTGAATATTGTGAAGAGTTACTAA 333 0.3514 MNPLARSLEELLPDRISSTYRCFILLRTALVVSTVCAAFLIPFFGFVMALIGSLFSILVSVILPSLCFMKIVGKKATYTQVSLSIVIVAFGVICGVLGTYSSVLNIVKSY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2851 110 Pfam Transmembrane amino acid transporter protein 23 103 IPR013057 -
Ssu2g2851 110 PANTHER OS05G0424000 PROTEIN-RELATED 1 108 - -
Ssu2g2851 110 PANTHER BNAA03G19350D PROTEIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2851 Ssu-Chr2 89585573 89588536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2851 1 103 Amino Acid or Auxin Permease AAAP Family AT5G02180 44.660 6.11e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2851 K15015 - gmx:100816368 197.978