Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2831 ATGGCGAGGAATACTACAACAGATGCAGATGATGAAAAACTAGAGAAGCATTGCATATATGAAACAAAACCTCATTCCAGACATCATCATGGAGAAAACACAACTGTCACAGAGGCCTCTAAGAAGGATGCGTCTACTACTGAATTTGGTCAACcttctaaaattGCAGCCAGAGTCCTTGCCAAGCTTCAAACTGGGGCACATGGAAAATGTGGGAAGGATAATGGAAGTATCAAAAGTAATTGTACAACTGATAATTCACGAAGCAATAGAGTGAACACTGAAAATGATTCATCTGGATGTTTAGTGCCAGTAACCCCATATCAGGATGTTGCTAATGGAGtagataaagaagaaaatctTCATAAATGTAATTCTTTATATGCAATGAAGAGAGCAGATGCAAAAGTTTGTGCTTGTAGAGCTTCCAATGTTTTCAAAGATAGTTCTAGCAAACCTTTCTCAGGGGAGTGGTGTGAATGTCGTGGTTCTCCCATTCCCCAAGACCCATTGTTAAGATTCCGCTGTCAATTCGATCAGAAGAAATTGGAGCCAGAGGCTACAAATATGGTGACAGGAGGTGAAGGGCAAAAGCAGCAAGAAGGGTTGCAATTGCCAAGTTCGAGGGAGAGTATAGGCAGCCATGAAAGTTTATCAAGCAAAGGGGATAATGAGTCAAACTCTGTTTTGGAGTGTGAAATCCACTGGGAAGACCTTCAATTAAGAGAGGAAATTGGACAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGGATCggaTGTTGCGGTCAAGGTTTACTTCGGGAATGGATACACAGAGGAGACTTTACAAGACTACAGAAAAGAGATTAATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATATTCACAGGAAAGGCTTGCCATTGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAACTCTGCACAGGAACAATCAGACATTAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGACCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGACTTTGGCCTATCTAGGCTGAAGGATGCAACTTTATTGACTACTAAATCTGGGAGAGGCACACCGCAGTGGATGGCCCCTGAAGTCCTCAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAATCTATTCCATGGGAAAATTTGAATTCCTTAcagGTTGTTGGAGTCGTAGGCTTTATGGATAGACGACTGGACCTTCCGGAGGGGCTTGATCCCCATGTTGCGTCAATCATCGATGACTGCTGGCGAAGTGATCCAGAGCAACGCCCATCATTTGAAGAGCTGATACAGAGAATGATGTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTTCAGAATCCTAA 1530 0.4118 MARNTTTDADDEKLEKHCIYETKPHSRHHHGENTTVTEASKKDASTTEFGQPSKIAARVLAKLQTGAHGKCGKDNGSIKSNCTTDNSRSNRVNTENDSSGCLVPVTPYQDVANGVDKEENLHKCNSLYAMKRADAKVCACRASNVFKDSSSKPFSGEWCECRGSPIPQDPLLRFRCQFDQKKLEPEATNMVTGGEGQKQQEGLQLPSSRESIGSHESLSSKGDNESNSVLECEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLQDYRKEINIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKTLHRNNQTLDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWENLNSLQVVGVVGFMDRRLDLPEGLDPHVASIIDDCWRSDPEQRPSFEELIQRMMFLVNRVTAVSIRRISES 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2831 509 PRINTS Tyrosine kinase catalytic domain signature 352 370 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 PRINTS Tyrosine kinase catalytic domain signature 313 326 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 PRINTS Tyrosine kinase catalytic domain signature 418 440 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 PRINTS Tyrosine kinase catalytic domain signature 399 409 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 MobiDBLite consensus disorder prediction 23 49 - -
Ssu2g2831 509 SUPERFAMILY Protein kinase-like (PK-like) 227 499 IPR011009 -
Ssu2g2831 509 MobiDBLite consensus disorder prediction 192 226 - -
Ssu2g2831 509 MobiDBLite consensus disorder prediction 23 37 - -
Ssu2g2831 509 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 31 495 - -
Ssu2g2831 509 SMART serkin_6 239 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2831 509 MobiDBLite consensus disorder prediction 188 226 - -
Ssu2g2831 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Ssu2g2831 509 Gene3D Transferase(Phosphotransferase) domain 1 318 502 - -
Ssu2g2831 509 Pfam Protein tyrosine and serine/threonine kinase 239 490 IPR001245 GO:0004672|GO:0006468
Ssu2g2831 509 Gene3D Phosphorylase Kinase; domain 1 232 316 - -
Ssu2g2831 509 CDD STKc_MAP3K-like 245 491 - -
Ssu2g2831 509 ProSiteProfiles Protein kinase domain profile. 239 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2831 509 PANTHER SERINE-THREONINE PROTEIN KINASE 31 495 - -
Ssu2g2831 509 ProSitePatterns Protein kinases ATP-binding region signature. 245 266 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2831 Ssu-Chr2 89342831 89346779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2831 232 497 MAP Kinase Kinase Kinase AT4G23050 75.188 1.08e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ssu2g2831 PK_Tyr_Ser-Thr 1.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2831 - - gmx:100813707 927.161