Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2826 ATGTTGGCTGGGTGTTGTAGTTCTACATTGTTGTCACCGACGCATAGATTGAGGAGTGAAGCATCTGCACAGTTTCATCAAGCCTGCCATTTCCAAGTACCTTCGATGAGCACGCAGAGATTGGACTTGCCTTGTAGCTTCCCGCGGAAGAAAGACACCTCGCGTTCCCAGCCCATTAGGCCCGTGGGCCTTTCAGTCGATAACAGGCCCATCGAAGCCTACTCTCTCAAGCACACCATTCGACTTCCACCTTTGGCAACCGCCACAAGCAGCAGCGCCCACCAGACGACGCCGTTCGTTGGGAGCAGAAGGGACAGAGACATCCAAGATGACGAGTTCTGGGGCAAGAGTCTGAAGCGGAGGCTTGCAGAGCACGGAAGCGTGGACGTGGACGAGTCTTCTcccaagagaaaaaaaaagggtagcaGTGACGATGTTAACGTTGTTGAAGGTTTGAGTTTAGCCCAAATGGGTGCTGGCAACTTTTGGTTACAACCTGGTGAGGAGGAAAGGGGGGTCTGTTTCGTTCCTAGTGAGGTGGAATCTGCTATAACTAAGATCACAGACCTTGGTGAGAAGAATGAAGCTGAGGGTAGCCACATTCCTCTTGCAAAGGAAGCCTCAGGAAACTCGAGCCTGAGGTTGAATGAGAATGGTTCGGAGCATGAAGTGGGTAACGGTAACGGTAACCGTAACGGGTCAAGGAATCCTCAAGAGGAGCATCGTGGATTTGAGCTTGTTAGCCTGCTTACCGCTTGTGTTGATGCTATTGGGTCCAAGAATGTGGCTGAGATTAACCACTTGGTAGCGAAATTGGGTGAGCTTGCGTCTCCCAGAGGAACCCCCATAAGCCGCGTTTGTGCTCATTTCACCGAAGCCTTAGCGATGAGGGTCACCAGGGTTTGGCCTCACgtgtttcaaattaatattcctCGGGAGGCGGAGGATGAAAGCGGCACCGCATTAAGGCTTCTGAATGAGGTGAGCCCAATCCCCAAGTTCCTCCACTTCACCTCAAACGAAATGCTGTTGCGGGCCTTTGAAGGGAAGGACAGGGTCCACATCATAGATTTCGACATAAAGCAAGGGCTTCAGTGGCCCAGTTTGTTCCAGAGCTTAGCTTCGAGGACAAATCCTCCGAGCCACGTCAGAATCACGGGGATAGGGGAGTCAAAACATGAACTGAATGAAACCGGCGACCGGCTGGCTGGGTTCGCGGAGGCACTGAACCTCCCCTTCGAGTTTCATCCTGTGGTGGATAGACTGGAGGACGTGAGGCTCTGGATGCTTCACGTGAAGGAACACGAAAGCGTTGCTGTGAACTGTGTTCTGCAGCTGCACAAGACGCTCTACGGGGGAGCGCTGAGGGATTTTCTGGGACTCATCCGCAGCACGAATCCCGCAGTAATGGTTATGGCAGAGCAAGAGGCGGAGCACGATGAAGCGAGGTTGGACGCGAGAGTGTGCAACTCGTTGAAATATTACTCCGCTCTGTTTGACTCCGTGGACGAGTGCGTTCCGGCGGAGAGCGTCGTGAGGAGTAAAATAGAGGAGATGTACGGTCGGGAGATCAGGGACATCGTTGCTTGCGAGGGAAGGGATCGGGTGGAGAGGCATCGGAGTTTCGGGAAGTGGAGGAAGATGATGGAGCAAGGAGGGTTCAGGTGGGTGGGGTTTAGCGAGAGGGAAAGGGTTCAGAGCCAGTTGTTGTTGAAGATGTACTCTTGTTGCAATGGTTTCAGTGTGAAGGGGCAAGCAGCACTCACTCTTGGTTGGGGAGACAACCCTCTCTACACTGTGTCCGCGTGGGCACCGCTTGATGCTGCAGGTGGTCCCTCATCCTCCTCTGTTTCTCAGACAACTTAG 1866 0.5225 MLAGCCSSTLLSPTHRLRSEASAQFHQACHFQVPSMSTQRLDLPCSFPRKKDTSRSQPIRPVGLSVDNRPIEAYSLKHTIRLPPLATATSSSAHQTTPFVGSRRDRDIQDDEFWGKSLKRRLAEHGSVDVDESSPKRKKKGSSDDVNVVEGLSLAQMGAGNFWLQPGEEERGVCFVPSEVESAITKITDLGEKNEAEGSHIPLAKEASGNSSLRLNENGSEHEVGNGNGNRNGSRNPQEEHRGFELVSLLTACVDAIGSKNVAEINHLVAKLGELASPRGTPISRVCAHFTEALAMRVTRVWPHVFQINIPREAEDESGTALRLLNEVSPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKHELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVLQLHKTLYGGALRDFLGLIRSTNPAVMVMAEQEAEHDEARLDARVCNSLKYYSALFDSVDECVPAESVVRSKIEEMYGREIRDIVACEGRDRVERHRSFGKWRKMMEQGGFRWVGFSERERVQSQLLLKMYSCCNGFSVKGQAALTLGWGDNPLYTVSAWAPLDAAGGPSSSSVSQTT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2826 621 ProSiteProfiles GRAS family profile. 237 604 IPR005202 -
Ssu2g2826 621 MobiDBLite consensus disorder prediction 191 239 - -
Ssu2g2826 621 MobiDBLite consensus disorder prediction 124 145 - -
Ssu2g2826 621 Pfam GRAS domain family 246 603 IPR005202 -
Ssu2g2826 621 MobiDBLite consensus disorder prediction 205 234 - -
Ssu2g2826 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 608 IPR005202 -
Ssu2g2826 621 PANTHER SCARECROW-LIKE PROTEIN 28 6 608 IPR030027 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2826 Ssu-Chr2 89285835 89287700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2826 1 604 GRAS Transcription Factor Family AT1G63100 51.085 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ssu2g2826 GRAS 1.5e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2826 - - qsu:111999471 784.637