Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2819 ATGGCTTCCGGTTCTGGCAAACCTCTGTTGTTGCTTAAGGATTATCTGAGGGATGACCTAAGTTCGTGTTCATCCAGCGGTTTCAGATCGCTCCCCCGCCGACACTGCTGCCTGCAACCTCGCTCTTCGGTAAAATCGGTTCTGCAGAAAGCTTTGGAAGCAGTGTTCAACGCCATCAAATCCCGAAGCTGTAAAGCGAAGAAAGGCGGCGTTCTTTCTAGAAGCTTTCATCGGAGGCTGCTCAACATAAGCTTCTGGAAAAGATCATCCGAGGGAGGTAAAGCCACGTTCAGGAGCTCCGCCAACAGTGACAGCTGGCCACGCTCCCATTTTACTGGTTCGTTAACCGACGCTGAGATGGAAGGACCAGTAACTACAACCAACACGTGCTCCGTCACGAATTCCGCAAGGGGTTGGCCGAATGAGGAGAAGGAACAATTTAGTCCTATATCAGTATTAGATTGTCCATTATTTAATGATGATGAAGAGATTACGTCTCCTTTCAATTCCCCTTCATGTTCCACCATGGAAGGAGCCAAACACAAGCACATCAAGAAGAGTCGACGTTTTAATCACGTGGCTTCGCTGAAGCTGGTTGACATAGAGAAAAAGGTGTCATGGTCAGAATTGCAGAAAGATGAACCAATATATAACCATCCAATAAAACCTTGTCCAGTGATAATATCAATTACGAGTAAACAAAATGGGAACAACAACCAGTTTCGTGACAACGTAGAAGAGAATGCGCTTGACCTTCTCACACATGTTAAAAATTCAATTCCATCTCTCTGTTTGAGAATTGAGGTAGAGAACTTGCTGTTTGATTTCTTCAAGCAGAGTATATGGGAGAATATTGATATCGGAAATTCCATGAAGCGTCACCTTTGCAAGGTGGCAGAGGATTGGATACGCGGGCAACACCAGGAACAATATGTGAGTTCGCAAATACAAAAGGAAAGGGAGATATACGTTAAGGAGATGGACAAGTGTGGGAATTGGAGAACTTCTGATGAAGAAATACAAGGCCTGGCCATGGAGCTTGAAGATGAGTTCTCCATTAGTTTGGTCAACGAACTCGTGGTTGACCTCACCACGTACTACTTTTGA 1107 0.4499 MASGSGKPLLLLKDYLRDDLSSCSSSGFRSLPRRHCCLQPRSSVKSVLQKALEAVFNAIKSRSCKAKKGGVLSRSFHRRLLNISFWKRSSEGGKATFRSSANSDSWPRSHFTGSLTDAEMEGPVTTTNTCSVTNSARGWPNEEKEQFSPISVLDCPLFNDDEEITSPFNSPSCSTMEGAKHKHIKKSRRFNHVASLKLVDIEKKVSWSELQKDEPIYNHPIKPCPVIISITSKQNGNNNQFRDNVEENALDLLTHVKNSIPSLCLRIEVENLLFDFFKQSIWENIDIGNSMKRHLCKVAEDWIRGQHQEQYVSSQIQKEREIYVKEMDKCGNWRTSDEEIQGLAMELEDEFSISLVNELVVDLTTYYF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2819 368 PANTHER OS04G0572500 PROTEIN 7 130 - -
Ssu2g2819 368 PANTHER OS04G0572500 PROTEIN 129 363 - -
Ssu2g2819 368 PANTHER OS04G0572500 PROTEIN 129 363 - -
Ssu2g2819 368 PANTHER OS04G0572500 PROTEIN 7 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2819 Ssu-Chr2 89196079 89198002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2819 141 364 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 31.933 1.62e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2819 - - aprc:113870201 459.914