Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2811 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAGGCTCACACCATGGACAGTCTCAACAAGTTGTTCCATTTCCAACCACTTCGAGCTCCTTAAGGATTCTGCTCTTACATGGCAACTTGGAAATATGGGTCCACGAGGCCAGAAACCTTCCCAACATGGACATGTTTCACAAGAAAACCGGAGACATGGTTTCCATGTTATCCCGAAAACTTGGTGGCAAAATCGAAGGCCACATGTCCAAAAATGTAACCAGTGATCCGTATGTTACTGTGTCTGTGGCGGGCGCTGTGATTGCCAGAACTTTTGTCATCAGAAACAATGAGAACCCTGTTTGGACGCAGCATTTCAATGTCCCCGTTGCACATCTTGCTGCTGAAGTCCACTTCGTTGTGAAGGACAGTGATATTGTGGGTTCTCAGATTATTGGAGCAGTGGGAATTCCAGTGGAACAGTTACGTACTGGTACAAGAGTTGAGGGCTTTTTCCCCATCCTTAATGCTAGTGGGAAACCTTGTAAGAATGGATCAGTCTTGAGTTTATCTATTCAGTACACCCCTGTTGAAAAGGTGCCTCTTTATAGTCATGGAGTAGGTGCTGGTCCTGATTATCAAGGGGTACCTGATACCTACTTTCCCCTTAGAAAAAGTGGACGAGTTACACTTTATCAAGATGCTCATGTTCAAGAAGGTTGCCTTCCCAGTTTCAAGATGGATGGGGATGTGACTTATAAGCATGGAAGTTGTTGGCGTGACATCTTTGATGCAATAAGTCAGGCCCGTCGTTTGGTTTACATTGTGGGGTGGTCTGTGTACTACAATGTTAGTCTCATTCGGGATACGGGTGATGGAAAGGCTTACACTTTAGGTGACCTTCTCAAAGCTAAGTCACAGGAAGGTGTCAGAGTGCTGCTCCTTGTGTGGGATGATCCCACTTCTAGAAGCATACTTGGATATAAAACGGTTGGACTTATGAACACTCATGATGAGGACACTCGCCAATTTTTCAAGCACTCTTCAGTACGTGTGCTTCTTTGCCCGCGATCTGGTGGAAAGGGACATAGCTGGGTCAAAAAGCAGGAAGCTGGAACAATCTATACCCACCATCAGAAGACAGTCATTGTAGATGCTGATGCAGGTcagaataaaagaaagattatagCCTTCATCGGAGGTCTTGATTTATGTGTAGGCCGATATGATACCCCAAACCATTCCATCTTTAGGACTTTGCAGACAACACACAAAGATGACTTTCATAATCCTAACTTTGAGGGGCCTGTTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCATTCCCAAGTTGATGGTCCAGCAGCATATGACATCCTCACCAATTTTGAGGAGCGTTGGTTACGGGCATTAAAAATGCATAGACTTCAAAAGATGAAAAGTTCACATGATGATTCATTACTGAAAATTGATAGAATCCCTGACATTGTTGGCATTGATGAAGTTCCTTGCCTAAATGAAGATAACCGGGAGACTTGGCATGTCCAGGTCTTTCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGGAACCAAAAGATGCTATAAGAAGGAACTTGGTTTGTGGAAAGAATGTACTGATAGACATGAGCATACATTCTGCGTATGTCAAGGCAATTCGAGCAGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATATAATTGGGATTCTTACAAAGACATTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTGAAAATAgccaacaaaatcaaacaaaatgagAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGTGTACCTACAAGTACAGCTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACTATTTATAAGGCTTTACAGGAGGCTGGGCTTGACAATGAGTATGAACCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGACCAAGAAAATTCTTTGAATGTTGTAAATCCTACTGGAGAAAACATGCCTCAGGCACTCACTAAAAAGAACCGGAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTACTGGGGTCTGCAAACATAAACCAGCGATCCATGGAAGGCACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAAAAAAGCAATCTAAACCTCGTGGGCAGGTGCATGGTTATAGAATGTCACTATGGAGCGAACATATAGGAGCTGTGGAAGAATGTTTTAAGCAACCAGAGAGCCTTGAATGTGTAAGACGGATAAGGTCATTGAGCGAGTTTAACTGGAGACAGTATGTAGCTGAAGAAGTAACTGAAATGGAAAGCCATCTGTTAAAATATCCGCTTGAAGTTGATTCAAAGGGTAAGGTGAAGCCTATTCTTGGCTGTGAGACATTCCCAGACGTTGGTGGGAACATAAGTGGCACTTTCACAGTACTCAAAGAAAATCTCACTATCTGA 2562 0.418 MAHLVYGETPSFGGSHHGQSQQVVPFPTTSSSLRILLLHGNLEIWVHEARNLPNMDMFHKKTGDMVSMLSRKLGGKIEGHMSKNVTSDPYVTVSVAGAVIARTFVIRNNENPVWTQHFNVPVAHLAAEVHFVVKDSDIVGSQIIGAVGIPVEQLRTGTRVEGFFPILNASGKPCKNGSVLSLSIQYTPVEKVPLYSHGVGAGPDYQGVPDTYFPLRKSGRVTLYQDAHVQEGCLPSFKMDGDVTYKHGSCWRDIFDAISQARRLVYIVGWSVYYNVSLIRDTGDGKAYTLGDLLKAKSQEGVRVLLLVWDDPTSRSILGYKTVGLMNTHDEDTRQFFKHSSVRVLLCPRSGGKGHSWVKKQEAGTIYTHHQKTVIVDADAGQNKRKIIAFIGGLDLCVGRYDTPNHSIFRTLQTTHKDDFHNPNFEGPVTGCPREPWHDLHSQVDGPAAYDILTNFEERWLRALKMHRLQKMKSSHDDSLLKIDRIPDIVGIDEVPCLNEDNRETWHVQVFRSIDSNSVKGFPKEPKDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDIGANNLIPMEIALKIANKIKQNERFSVYIVIPMWPEGVPTSTATQRILFWQFKTMQMMYETIYKALQEAGLDNEYEPQDYLNFFCLGNREIPDQENSLNVVNPTGENMPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKQSKPRGQVHGYRMSLWSEHIGAVEECFKQPESLECVRRIRSLSEFNWRQYVAEEVTEMESHLLKYPLEVDSKGKVKPILGCETFPDVGGNISGTFTVLKENLTI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2811 853 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Ssu2g2811 853 Pfam Phospholipase D Active site motif 700 726 IPR001736 GO:0003824
Ssu2g2811 853 Gene3D Endonuclease Chain A 509 752 - -
Ssu2g2811 853 Gene3D Endonuclease Chain A 237 485 - -
Ssu2g2811 853 PIRSF PLD_plant 27 853 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Ssu2g2811 853 PANTHER PHOSPHOLIPASE D 8 853 IPR015679 -
Ssu2g2811 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Ssu2g2811 853 CDD C2_plant_PLD 36 187 - -
Ssu2g2811 853 Gene3D C2 domain 35 181 IPR035892 -
Ssu2g2811 853 SUPERFAMILY Phospholipase D/nuclease 206 466 - -
Ssu2g2811 853 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Ssu2g2811 853 Pfam Phospholipase D C terminal 773 843 IPR024632 -
Ssu2g2811 853 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Ssu2g2811 853 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 853 - -
Ssu2g2811 853 SMART C2_3c 41 163 IPR000008 -
Ssu2g2811 853 Pfam C2 domain 40 166 IPR000008 -
Ssu2g2811 853 SUPERFAMILY Phospholipase D/nuclease 534 784 - -
Ssu2g2811 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Ssu2g2811 853 SMART pld_4 365 400 IPR001736 GO:0003824
Ssu2g2811 853 SMART pld_4 699 726 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2811 Ssu-Chr2 89049885 89055638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2811 15 853 Phospholipase D Gene Family (Wang group) AT2G42010 68.555 0.0 1280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2811 K01115 - gmx:100786241 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2811 2 89049885 89055638 Ssu2g2811 2 89049885 89055638 ECH