Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2800 ATGACCATAACCAAGCAAGTATTGTCCACCAAGATGGAACTTGCATTGCCTCTTGCTCTTGCTCTTATTTTCGTGCTAAGTATATGTCCAACTTCAGCATACCAATATCCAGAGTTCGGGGATGCAAAAGAAGAACGTTATTTGCCAACAGAAAAACTCGATGTTCAAAGCAGCTTGATGACTTACATTGTTCGCGTTAAAAAGCCCCAGGGTGATGATTCTCTTCAGTCTAAGGACTTGCATAGTTGGTACCATTCGCTTCTGCCAGCTAGTACAAAAACTGAGAACCAGCAACGCATTACTTTCTCATACAGCAACGTGGTGGATGGATTTGCTGTGAAGTTGACCCCAGAAGAAGCCAAAGCTCTTCAAGAGAAGGAGGAGGTTGTGTCAGCCCGTCCTGAAAGGACCTTTTCTTTACACACAACTCACACTCCAAGCTTCTTGGGGTTGCAACAGGGACTAGGATTGTGGAACAATTCCAATTTTGGCAAAGGCATCATAATTGGAATTCTGGATACAGGAATAAAGCCTGACCACCCTTCTTTTTCTGATGAAGGAATGCCACTCCCACCAGCAAAGTGGAATGGCCGCTGTGAATTCTCAGGGGGGAGGACTTGCAATAACAAGCTCATTGGTGCAAGAAATCTTCtcaacaaaaactcaaattcaTCCACTCCACCACTGGATGATGTTGGTCATGGGTCCCACACAGCTAGCACAGCCGCAGGAAGATTTGTCCCGGGTGCTAACGTCTTTGGCAATGCCAAGGGTACTGCAGTTGGCATGGCACCTGATGCACACTTAGCAATTTACAAGGTATGCGACCTCTTTGGTTGTCCTGAAAGTGCAATATTAGCTGGAATGGACACTGCCATTGAAGATGGTGTGGATGTACTTTCTCTTTCCCTTGGGGGACCACCTTCTCCTTTCTATGACGATCCAATTGCACTCGGTGCATTCAGTGCAATTCAGAAGGGAATTTTCGTTAGTTGTTCAGCTGCTAACGCTGGTCCTTTTTATTCCACTTTGTCTAATGAGGCTCCCTGGATTCTCACCGTTGGTGCCAGCACCATTGACAGAAGAATTGTAGCAACAGCAAAACTTGGCAATGGGGAAGAGTTTAATGGCGAATCGGTGTTCCAACCCAAAAACTTCACGTCCACGTTATTACCACTTGTGTATGCAGGTGCAAATGGAAGTGACTCGTCTACCTTTTGTGCCCCAGGATCCTTAAAGAACGTGGATGTCAAGGGAAAGGTAGTGTTGTGTGAGGTAGGTGGATTCGTTAGAAGAGTAGACAAAGGACAAGAAGTTAAGAAAGCTGGTGGTGCGGCCATGATCCTCATGAACACACAAATTGAAGACTTCAATCCCACTGCTGATGTTCACGTTCTTCCAGCTGCACACGTAAGTTACACTGCTGGGTCAGCCatcaaaaaatacataaactCAACCTCAACGCCAACAGCCACAATCTTGTTCAGTGGAACCGTTATTGGGAATCCACTTGCACCCGCAGTTACTTCCTTTTCCTCAAGAGGTCCAAGCCATGCAAGCCCGGGAATTCTGAAGCCAGACATCATTGGACCAGGACAGAACATTCTGGCTGCATGGCCTGTGTCTTTGGACAACAATGTTCCTCCATTCTACATAATTTCAGGCACCTCAATGTCTTGCCCTCATCTCAGTGGCATTGCAGCTTTGCTTAAAAACTCTCATCCAGATTGGTCTCCTGCTGCCATAAAATCAGCAATCATGACCACTGCTTATACAGTGAATCTTGGAGGCAAACCTATATTTGACCAAAGGCTTCTACCAGCTGATGTGTTTGCCACAGGTGCTGGACATGTCAACCCTTTGAAGGCCAGTGATCCAGGGCTTGTTTATGATATTGAACCAAGCGATTACATTCCTTATTTGTGTGGTTTGAACTACACTGACAAAGAAGTTGGACtgattttgaaccaaaaagtGGAATGCTCGGAGGTGAAAAGCATAGCGGAAGCGCAACTCAATTATCCCTCATTTTCTGTTCGGTTGGCGTCTAGTTCACAGTTCTACACCAGAACGCTCACAAATGTTGGACCCACCAACATAACCTACTTTGTGGAAATTGATGCACCTTTGGCAGTGGGTATGAGCATAAGCCCTTCTCAGATAACATTCACGGAGGTGAATCAGAAGGTTACTTACTCGGTTGGGTTTTTACCTGAAGACAGAAAGAATAGAGGAGATCACCCGATTGCTCAGGGGTCTATCAAGTGGGTATCTGGCAAATATTCTGTTAGCATCCCTATAGCTGTCATCTTCGTGTGA 2319 0.4493 MTITKQVLSTKMELALPLALALIFVLSICPTSAYQYPEFGDAKEERYLPTEKLDVQSSLMTYIVRVKKPQGDDSLQSKDLHSWYHSLLPASTKTENQQRITFSYSNVVDGFAVKLTPEEAKALQEKEEVVSARPERTFSLHTTHTPSFLGLQQGLGLWNNSNFGKGIIIGILDTGIKPDHPSFSDEGMPLPPAKWNGRCEFSGGRTCNNKLIGARNLLNKNSNSSTPPLDDVGHGSHTASTAAGRFVPGANVFGNAKGTAVGMAPDAHLAIYKVCDLFGCPESAILAGMDTAIEDGVDVLSLSLGGPPSPFYDDPIALGAFSAIQKGIFVSCSAANAGPFYSTLSNEAPWILTVGASTIDRRIVATAKLGNGEEFNGESVFQPKNFTSTLLPLVYAGANGSDSSTFCAPGSLKNVDVKGKVVLCEVGGFVRRVDKGQEVKKAGGAAMILMNTQIEDFNPTADVHVLPAAHVSYTAGSAIKKYINSTSTPTATILFSGTVIGNPLAPAVTSFSSRGPSHASPGILKPDIIGPGQNILAAWPVSLDNNVPPFYIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTAYTVNLGGKPIFDQRLLPADVFATGAGHVNPLKASDPGLVYDIEPSDYIPYLCGLNYTDKEVGLILNQKVECSEVKSIAEAQLNYPSFSVRLASSSQFYTRTLTNVGPTNITYFVEIDAPLAVGMSISPSQITFTEVNQKVTYSVGFLPEDRKNRGDHPIAQGSIKWVSGKYSVSIPIAVIFV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2800 772 Pfam Fibronectin type-III domain 671 769 IPR041469 -
Ssu2g2800 772 SUPERFAMILY PA domain 392 488 IPR046450 -
Ssu2g2800 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 50 141 IPR037045 -
Ssu2g2800 772 CDD PA_subtilisin_like 366 493 - -
Ssu2g2800 772 Gene3D - 641 771 - -
Ssu2g2800 772 SUPERFAMILY Subtilisin-like 140 628 IPR036852 GO:0004252|GO:0006508
Ssu2g2800 772 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 43 771 - -
Ssu2g2800 772 Gene3D Peptidase S8/S53 domain 166 637 IPR036852 GO:0004252|GO:0006508
Ssu2g2800 772 Gene3D - 360 500 - -
Ssu2g2800 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 43 771 IPR045051 -
Ssu2g2800 772 ProSiteProfiles Serine proteases, subtilase domain profile. 137 624 - -
Ssu2g2800 772 Pfam PA domain 392 479 IPR003137 -
Ssu2g2800 772 CDD Peptidases_S8_3 140 591 IPR034197 -
Ssu2g2800 772 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Ssu2g2800 772 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Ssu2g2800 772 PRINTS Subtilisin serine protease family (S8) signature 164 183 IPR015500 -
Ssu2g2800 772 Pfam Subtilase family 164 593 IPR000209 GO:0006508|GO:0008236
Ssu2g2800 772 Pfam Peptidase inhibitor I9 61 141 IPR010259 -
Ssu2g2800 772 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 169 180 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2800 Ssu-Chr2 88905858 88908176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2800 61 758 Subtilisin-like Serine Gene Family AT1G04110 44.701 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2800 - - gmx:100799902 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2800 2 88905858 88908176 Ssu2g2800 2 88905858 88908176 ECH
Ssu6g1542 6 25309390 25310967 Ssu2g2800 2 88905858 88908176 PCT