Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2799 atGGAGAAAAGCAAGGTGATGGAGCTTGGATTGCTTGTTGGCCTCATTTTCATGCTTAGCGCCAACCCAGCTTCAATGGCTGAAGAGCATGGCAACAACTTACTCACTTACATTGTTCACGTCAAAAAGCCCGAGAATAGACCTTCTCTTCAATCAGAAGAGTTACATAACTGGTACCACTCGTTCTTGCCACAAACCACCAACAAAAACCGAATGCTTTTCTCTTACCGCAACGTGGCCACTGGATTTGCTGTGAAGTTAACCCAAGAAGAAGCCGAAGCTCTTCAAGAGAAGGAGGAGGTTGTGTCAGCCCGTCCTGAAAGGATCCTTTCTTTGCACACAACCCACTCTCCATCCTTCTTGGGGCTGCGACAAGGAGTAGGATTGTGGAATGACTCCAACCTTGGCAAAGGCATCATAATTGGAGTTATAGACACAGGTATATACCCCTTGCATCCATCCTTTAACGATGAAGGGATGCCAGCTCCACCAGCAAAATGGAAAGGACACTGTGAATTCACAGGAGAAAGGACATGCAACAACAAGCTCATTGGTGCAAGGAATTTACTCAAAAGCGCTATTGAAGAGCCTCCTTTTGAGAACATCTTCCACGGAACCCATACAGCCGCAGAGGCCGCGGGAAGATTTGTAGAGAACGCTAGTGTTTTCGGCAACGCTCAGGGCACTGCAGCTGGCATGGCACCCAATGCTCACATTGCAATGTACAAAGTGTGCAACGACAAAGTGAGCTGCACTGAAAGTGCCATCTTAGCCGCAATGGACATAGCCATTGACGATGGCGTGGATGTTCTTTCTCTGTCCCTCGGTTTAGGCTCTCTTCCATTCTTCGAAGACCCAATCGCGATAGGCGCATTTGTCGCCATTCAGAATGGAGTTTTCGTTAGTTGCTCAGCCGCAAACTCAGGCCCCGAATACAGCACTCTTTCAAACGAAGCCCCGTGGATTCTCACCGTTGGTGCAAGCACCATTGACAGGAAAATAGCGGCATCAGCAGTGCTTGGAAACGGGGCAGAGTATGAAGGGGAAACTCTATTCCAACCCAAGGACTTTGTCCCAAGTTTGTTGCCACTTGTGTATGCCGGTGCAAATGGAAACCAATCCTCCGCCTTCTGTTTCCCGGGATCCTTAAAGAACCTTGATGTTAAAGGAAAGGTGGTGGTGTGCGACATAGGTGGAGGTTTTCCAAGTGTGGCCAAAGGACAAGAAGTTCTAAACGCTGGTGGCGTGGCCATGATTCTCACCAACCCACAATCTATTGGCTTCAGTACTTTCGCTGTTGCTCATGTTTTGCCCGCGGTGCATGTGAGTTACGCAGCTGGGTTGGCCATAAAATCTTACGTAAATTCAACCTATTCACCGACCGCAACAATCTCATTCAAAGGAACCGTCATTGGTGATGCACTTGCTCCCACggttgtttcattttcttcaaggGGTCCAAGCCAGGAAAGCCCTGGGATTCTAAAACCTGACATTATTGGACCCGGAGTGAACATTCTAGCTGCATGGGGTGTGTCCGTAGACAACAAAATCCCAGCATATAACATTGTTTCAGGAACCTCAATGTCTTGCCCTCACCTAAGTGGCGTTGCTGCTTTGCTCAAAAGTGCACACCCTGATTGGTCCCCTGCGGCTATTAAGTCAGCAATCATGACCACTGCTAACACAGTCAACCTCGGAGGCAAACCCATATTGGACCAAAGGCTTCTACCTGCTGACGTATTTGCCACTGGTGCAGGCCATGTTAACCCTAATAAAGCAAATGACCCGGGGCTTGTTTATGATATCCAACCAGATGCTTATATTCCTTACTTGTGTGGTTTGGGTTATGAGGATAGAGAAATCGAAATTCTTGTGCAAAGGAGAGTGAGATGCTCCGGTATAAAAGCCATACCACAAGCACAACTCAATTACCCTTCGTTCTCTATTCTGATGGGGTCTACTACACAGTACTACACCAGAACTTTGACTAATGTTGGGCCCGCAGAGTCAACTTACACCGTGGATCTTGAGGTGCCTTTGGCCTTGGGCATGAGCGTGAACCCTAGTCAGATAACATTCACGAAGCCTCCTTACCACTCCCTTTGCTCTCCCCAACGTCAAACTCCTTCCTCACCATACACCACTGGAAAACCATCATTCTCCCAGGCTGATGGCGGCAAGACGTCGCCAGTTATGGGGGCAGAAATGTACTATAAGAAGCGTCCAGAGTTTATGAAGTTAGTGGAGGAGTTCTACCGAGCCACCGTGCTTTATCAGAGACACTCGATGAGGGAGGAGTTTGGTGTTGTGGAAAGAGAAGTGAAGGGAGTGGTACGGAGAATGATGTCTGAAATTACCCTTAGAAATGATGATTTGGATGGTTATGCACAATTTGCACCTTCCAATTCAACCACTAATGCAATTGCTTTTAGACCACCACCAATAAGAGGCAAGACATATGCTTCGCAAGTTAGATATTCCACATTTGGTTCTGTTCCATTTCCACCTGCACTTCTGGATCATTCAACACACAACCACGTTTCGTGA 2550 0.4725 MEKSKVMELGLLVGLIFMLSANPASMAEEHGNNLLTYIVHVKKPENRPSLQSEELHNWYHSFLPQTTNKNRMLFSYRNVATGFAVKLTQEEAEALQEKEEVVSARPERILSLHTTHSPSFLGLRQGVGLWNDSNLGKGIIIGVIDTGIYPLHPSFNDEGMPAPPAKWKGHCEFTGERTCNNKLIGARNLLKSAIEEPPFENIFHGTHTAAEAAGRFVENASVFGNAQGTAAGMAPNAHIAMYKVCNDKVSCTESAILAAMDIAIDDGVDVLSLSLGLGSLPFFEDPIAIGAFVAIQNGVFVSCSAANSGPEYSTLSNEAPWILTVGASTIDRKIAASAVLGNGAEYEGETLFQPKDFVPSLLPLVYAGANGNQSSAFCFPGSLKNLDVKGKVVVCDIGGGFPSVAKGQEVLNAGGVAMILTNPQSIGFSTFAVAHVLPAVHVSYAAGLAIKSYVNSTYSPTATISFKGTVIGDALAPTVVSFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAYNIVSGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTANTVNLGGKPILDQRLLPADVFATGAGHVNPNKANDPGLVYDIQPDAYIPYLCGLGYEDREIEILVQRRVRCSGIKAIPQAQLNYPSFSILMGSTTQYYTRTLTNVGPAESTYTVDLEVPLALGMSVNPSQITFTKPPYHSLCSPQRQTPSSPYTTGKPSFSQADGGKTSPVMGAEMYYKKRPEFMKLVEEFYRATVLYQRHSMREEFGVVEREVKGVVRRMMSEITLRNDDLDGYAQFAPSNSTTNAIAFRPPPIRGKTYASQVRYSTFGSVPFPPALLDHSTHNHVS 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2799 849 Pfam PA domain 363 450 IPR003137 -
Ssu2g2799 849 Coils Coil 85 105 - -
Ssu2g2799 849 MobiDBLite consensus disorder prediction 699 727 - -
Ssu2g2799 849 Gene3D - 612 722 - -
Ssu2g2799 849 Gene3D Peptidase S8/S53 domain 138 608 IPR036852 GO:0004252|GO:0006508
Ssu2g2799 849 CDD PA_subtilisin_like 339 464 - -
Ssu2g2799 849 Gene3D - 331 471 - -
Ssu2g2799 849 SUPERFAMILY Subtilisin-like 112 599 IPR036852 GO:0004252|GO:0006508
Ssu2g2799 849 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 141 152 IPR023827 -
Ssu2g2799 849 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 696 IPR045051 -
Ssu2g2799 849 CDD Peptidases_S8_3 112 562 IPR034197 -
Ssu2g2799 849 ProSiteProfiles Serine proteases, subtilase domain profile. 120 595 - -
Ssu2g2799 849 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 696 - -
Ssu2g2799 849 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Ssu2g2799 849 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Ssu2g2799 849 Pfam Subtilase family 136 568 IPR000209 GO:0006508|GO:0008236
Ssu2g2799 849 Pfam Fibronectin type-III domain 642 696 IPR041469 -
Ssu2g2799 849 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Ssu2g2799 849 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Ssu2g2799 849 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Ssu2g2799 849 MobiDBLite consensus disorder prediction 699 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2799 Ssu-Chr2 88894613 88901466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2799 11 694 Subtilisin-like Serine Gene Family AT1G04110 43.923 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2799 - - gmx:100783595 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2799 2 88894613 88901466 Ssu2g2799 2 88894613 88901466 ECH