Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2767 ATGGTTGGCCTCAATTCAGTTCCTAATTGGCTTCTCACTCTCAAGGAAGAGAAGTTTTTCACTCGCTGTTTGATTCATGACTCTGTAAAGAAGAACGAGAAGAACATTTTTTGCTTAGATTGCTGCACGAGCATTTGCCTCCACTGTTTGCCCTTTCACCGCTCTCACGTTCTTTTGCAGATACGAAGATACATGTACAACGACGTATTACGGGTTGGCGATGCTCAGACATTGTTGAATTGTTCCCTTGTTCAACCGTACACAACAAATAAAAGTAAGGTTGTGTTTTTGAAACAAAGGCCACACTCCCGCTCTCTCAAAGGATGTAGCAACCTTTGCATCACATGTGGCCGTAGCCTCCAGGACCCATACATCTTCTGCTCTCTGTCATGCAAGCAGGTGCATCAACATCTTCTACTAATTACCAAAAGCACAACCATAAAGGACACTAGGAACAAGTATGAATTCTCTGTGCTACTAGACAAAGAAAGAAGCGGCGAGAACCCACGAGAAATTGAAGTTAGCCAAGTCACAACAGATTCAGTCCTAGACTCACCCACGTGGACTTCGTTATGCACCGTGTCTGGTTCAACAagtactactactactactactagtGAGGGTGTGGCAGAGAATGAGTCACTCAAAAAGAAACGTAGCAGTGTTGACATTGTGCCACAGATTTGGTACACCATGGTGAACCGGCGAAAAGGTGTCCCTCATCGATCTCCGTTGTACTGA 741 0.4345 MVGLNSVPNWLLTLKEEKFFTRCLIHDSVKKNEKNIFCLDCCTSICLHCLPFHRSHVLLQIRRYMYNDVLRVGDAQTLLNCSLVQPYTTNKSKVVFLKQRPHSRSLKGCSNLCITCGRSLQDPYIFCSLSCKQVHQHLLLITKSTTIKDTRNKYEFSVLLDKERSGENPREIEVSQVTTDSVLDSPTWTSLCTVSGSTSTTTTTTSEGVAENESLKKKRSSVDIVPQIWYTMVNRRKGVPHRSPLY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2767 246 Pfam PLATZ transcription factor 62 132 IPR006734 -
Ssu2g2767 246 PANTHER BNAA09G38660D PROTEIN 5 246 - -
Ssu2g2767 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2767 Ssu-Chr2 88379843 88381026 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu2g2767 PLATZ 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2767 - - gmx:100806286 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2767 2 88379843 88381026 Ssu2g2767 2 88379843 88381026 ECH