Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2764 ATGTCGGCTTACAAAGACGAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTTCCCAAATCCGGTATTATGTTCCAAGACATAACTACTTTATTGCTCGATCCCAAAGCGTTTAAGGACACAATCGATTTGTTCGTGGAGCGATACAAGGGCAAAAACATTTCTGTTGTAGCAGGAATTGAAGCTCGGGgctttatttttggtcctcccaTTGCGCTGGCTATAGGTGCAAAGTTTGTACCATTGAGGAAACCGAGGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAACCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACACTCTGTGCAGCTATGGACTTGCTAGGTAAGTGCCCTGTGAGCAAATTCTGA 462 0.4221 MSAYKDEDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPRKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLGKCPVSKF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2764 153 SUPERFAMILY PRTase-like 12 147 IPR029057 -
Ssu2g2764 153 CDD PRTases_typeI 48 145 IPR000836 -
Ssu2g2764 153 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 147 - -
Ssu2g2764 153 Hamap Adenine phosphoribosyltransferase [apt]. 14 153 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ssu2g2764 153 Pfam Phosphoribosyl transferase domain 49 148 IPR000836 -
Ssu2g2764 153 Gene3D - 2 152 IPR029057 -
Ssu2g2764 153 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2764 Ssu-Chr2 88315491 88318826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2764 1 150 PRT Gene Family AT1G27450 74.000 6.38e-78 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2764 K00759 - gmx:100306411 285.804