Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2746 atgccAAGGGAGTTGACACTGGACACCATCTCAGGATTATGGAACTGGTGTGGTACAACGAAGGATAGGACCACCTGCTTAGGTAAGGTTCATGGATCACTTGCACGTGCCGGCAAAGTTAGAGGCCAAACCCCCAAAGTGGCGAAGCAGgacaagaagaagaagccacGTGGCCGCGCCCACAAGAGGATGCAGTACAATCGCCGATTCGTCACAGCAGTGGTGGGATTCGGCAAGAAGAGGGGACCCAACTCGTCTGAGAAGTGA 267 0.4944 MPRELTLDTISGLWNWCGTTKDRTTCLGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2746 88 MobiDBLite consensus disorder prediction 38 64 - -
Ssu2g2746 88 MobiDBLite consensus disorder prediction 48 64 - -
Ssu2g2746 88 PANTHER 40S RIBOSOMAL PROTEIN S30 27 88 - -
Ssu2g2746 88 Pfam Ribosomal protein S30 29 85 IPR006846 GO:0003735|GO:0005840|GO:0006412
Ssu2g2746 88 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 27 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2746 Ssu-Chr2 87981033 87984763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2746 27 88 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.161 4.28e-30 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2746 K02983 - sly:101247244 117.472