Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2743 ATGAAGATGGTGGAAAATGGAGGAGCTATGGAAGATGTAGCAATAATTGGAGGATTGATAGGAGTGCAACTTATCTACGCAGGGAACGCTGTGTTGATGAGTTATTCTATGTCATTGGGCTTCAGCTCTCTTACCATTATCATTTTAACTTCTCTGGCAACATTCCTTATTCTCTTCCCCATTGCCTTCTGTGTTGAAAGGAGTAAGTGGCCCAAGCAATGCAGTTTCAAGTTGATTATGCAGCTATTGTGTCTTTCATTTGGAGgACTAGTCTTCCAGTATTTATTCCTCAAAGGAATCAATCTTACTTCGCCAGCAATGGGAACGGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCATCATTGCATGGATTTCtggGTTAGAGGAAGTCAACTTGAGCAACAAGTATAGTAAAGTAAAAACCCTAGGTACATTGCTCTGTGTATTCGGAGCTCTCACGATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCGAGAAAAATGCTACAATTCAATTATCACAGACATCATCAGGTTTTACCTTTGACATACAGAAGATAATCGGTTGCCTCTATCTCGTGGTTGCAGTCTTGATTTTATCAAGCAACGTTGTCCTGCAGGCTTTTACTCTCGGAGATTTTCCTGCACCGATGTCCTTGGGTGCAATAACGTCCTTGTTTGGGGCGTTCATGACTGCAATTGTTCAGTTACTTGAAGACCGCAAACTGAAAGCTGGTTGGCTACTTGTGAGCTCTGGAGACTTGATTGGCTATTCTATTCTGGCAGGTGCTGTGAGTGGAATATGCCTGAGCTTCAATGGGTGGGCACTCAAGAAGAGAGGGCCAGTGTTTGTCTCCATGTTTAGCCCTATTGGTACAGTCTGCTCTGTTATTTTCTCGGTAGTTACCCTAGGAGACTCTATTAGTATTGGAAGCCTTGCAGGTATGTTTCTCATGTTCACTGGGCTCTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGACACACAGATGGAGATGGCTTAGAGAGTGAGTGTGATGCAGAGAGGCCTCTTTTATCTTAA 1065 0.4338 MKMVENGGAMEDVAIIGGLIGVQLIYAGNAVLMSYSMSLGFSSLTIIILTSLATFLILFPIAFCVERSKWPKQCSFKLIMQLLCLSFGGLVFQYLFLKGINLTSPAMGTAMPNLAPGLIFIIAWISGLEEVNLSNKYSKVKTLGTLLCVFGALTMSIMQSISAPATEKNATIQLSQTSSGFTFDIQKIIGCLYLVVAVLILSSNVVLQAFTLGDFPAPMSLGAITSLFGAFMTAIVQLLEDRKLKAGWLLVSSGDLIGYSILAGAVSGICLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVVTLGDSISIGSLAGMFLMFTGLYLVLWAKGKEGHTDGDGLESECDAERPLLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2743 354 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Ssu2g2743 354 Pfam EamA-like transporter family 20 156 IPR000620 GO:0016020|GO:0016021
Ssu2g2743 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 333 - -
Ssu2g2743 354 PANTHER WAT1-RELATED PROTEIN 13 345 IPR030184 GO:0016021|GO:0022857
Ssu2g2743 354 PANTHER WAT1-RELATED PROTEIN 13 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2743 Ssu-Chr2 87905511 87908084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2743 10 345 Nodulin-like Gene Family AT5G47470 59.172 2.67e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2743 - - gmx:100784734 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2743 2 87905511 87908084 Ssu6g1625 6 27033551 27036702 PCT