Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g2724 | ATGGGAGAGGAAGACAGCGAAGTCCGTACAACTGCTTCCTCCACCTTCACCGAAGAGGGCATTATTAATTCAGAGAAGAAAAGTGAAGGCGAAGAAGCGAACGTTGAGAGTAACACGACGAAGAAGAGAAGTGGGAAGCACCCAACTTATCGCGGGGTTCGCATGCGTCAGTGGGGAAAATGGGTATCAGAAATAAGAGAGCCCAGAAAGAAGTCCAGAATTTGGCTCGGCACTTTTCCTACGCCAGAGATGGCGGCTCGAGCCCACGACATTGCGACTCTCACTATCAAAGGCACATCTGCTTTCCTTAATTTCCCCGAATTAGCCTCACACCTTCCACGCCCACCCACCACATCCCCTAAGGATATCCAAGCCGCCGCCGCCAAAGCAGCTACACTCAATTGTGAAGCCCAGGCCCAAGCCCAAGCCCAAGCCCAAGCCAAGCTGAGCCGATCAATTTCCTCCTCCCAACAATCATCGAATTCGTCGTTAAGCGGTGAGGATGACGCGTTCTTGGACCTCCCCGATCTTTTACTCGACTCAAGTTACAGTGCAGGTGAGTTTGGTTACTCTGCGCCGTGGCTCGTAGCTGGAGCTGAATATCTAGACTCGGGTTTCCGCCTCCAAGAGCCTCCTTTTTTCCCTTGGGAGTCTTActga | 660 | 0.5197 | MGEEDSEVRTTASSTFTEEGIINSEKKSEGEEANVESNTTKKRSGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDIATLTIKGTSAFLNFPELASHLPRPPTTSPKDIQAAAAKAATLNCEAQAQAQAQAQAKLSRSISSSQQSSNSSLSGEDDAFLDLPDLLLDSSYSAGEFGYSAPWLVAGAEYLDSGFRLQEPPFFPWESY | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g2724 | 219 | PRINTS | Ethylene responsive element binding protein signature | 50 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | PRINTS | Ethylene responsive element binding protein signature | 72 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 17 | 184 | - | - | |
Ssu2g2724 | 219 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Ssu2g2724 | 219 | MobiDBLite | consensus disorder prediction | 22 | 43 | - | - | |
Ssu2g2724 | 219 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Ssu2g2724 | 219 | CDD | AP2 | 50 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | SUPERFAMILY | DNA-binding domain | 49 | 107 | IPR016177 | GO:0003677 | |
Ssu2g2724 | 219 | Pfam | AP2 domain | 48 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 | 17 | 184 | - | - | |
Ssu2g2724 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 49 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | Gene3D | AP2/ERF domain | 49 | 107 | IPR036955 | GO:0003700|GO:0006355 | |
Ssu2g2724 | 219 | SMART | rav1_2 | 49 | 112 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g2724 | Ssu-Chr2 | 87676697 | 87677356 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g2724 | 46 | 214 | AP2-EREBP Transcription Factor Family | AT2G44940 | 48.259 | 4.51e-56 | 178 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Ssu2g2724 | AP2 | 2.3e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g2724 | - | - | gmx:100817503 | 257.684 |