Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2718 ATGAGTAGATTCATCTTCCTCTTCCCCTTCCTCTTCTGTGTTTTCAGCTTCCAACTTTCTGTTATTAAGGTGACTTATGCAAGCAGCATCCATGCACCAAAGTGCGGAGATGCAGGTCCTGACATCCGCTATCCATATCAGATAAAAGGTCAGCAGCAACAGTATGGGGCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGACAACCTCACCACTATCCACTTTCCATCTTCCAGAGATTTGGTAGTGAAGTCCATCTCCTATGACaccaaaaatattcatttacttGACCCCAAAAATTGTATCTATCATGTCTTTCTGAGCCTCAATCTCTCCCTTACACCGTACCACTATTTTTATGTTCTGAAAAACTATACATACCTCAACTGCTCGACCAGCCTTCCACATCCTTTCGTGGAGGTTCCGTGTTTAAGTGCTTCAAGTTATCATGTCTACACAGTTGACCCTGCACTGCCTGTGCCAGATTCATGTCAACGAGTCAAAACCGTTGCCATTCCTTTTGCGTATAGCCCTTATCTCTCAGACAATAGTCTTGGTCTTAGATTAACATGGGACTTGCGTGAACCTGCAGACAAGGAAGCAGAAAGCCGGACTAGAGGCTCCCACACATCGCGTAATATAgTTATAGGCTCCAGCATCTGCGTTTTCGTGATGGCAATGCTTGTAACTATAAGCATAAAGGTTCATGGAGCAACGAGGAATCGCCATCAGAAAGAAGCGCAGTTATTGCAGAACTTGACGGATTTCTAG 768 0.4362 MSRFIFLFPFLFCVFSFQLSVIKVTYASSIHAPKCGDAGPDIRYPYQIKGQQQQYGALPGFELLCKDNLTTIHFPSSRDLVVKSISYDTKNIHLLDPKNCIYHVFLSLNLSLTPYHYFYVLKNYTYLNCSTSLPHPFVEVPCLSASSYHVYTVDPALPVPDSCQRVKTVAIPFAYSPYLSDNSLGLRLTWDLREPADKEAESRTRGSHTSRNIVIGSSICVFVMAMLVTISIKVHGATRNRHQKEAQLLQNLTDF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2718 255 PANTHER PROTEIN, PUTATIVE-RELATED 10 248 - -
Ssu2g2718 255 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 248 - -
Ssu2g2718 255 Pfam Wall-associated receptor kinase galacturonan-binding 34 96 IPR025287 GO:0030247
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2718 43 219 C3H Transcription Factor Family AT2G25410 31.053 2.86e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2718 - - gmx:100790327 395.201