Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2705 ATGGGCCATTGTGTTTCGCGAAGAAGCCTAGCTCTACTCTCACCTTGCGTGGTGGACTGGGTTGACGGTGATAGGCACCTCGCTTCTCCTCCGCCAGATCTCCTCATCGTCGCCACTGCCGCCGACGAACTTCTCCTCGGCGTTCTTCTCCGCCTCTCACTCTCTTATACAATAACAGCAAGGCGTAAAAGGAGGTTGAGAGCagaaattgtgattttcaattatAGGGACCGTTACAACATGCTTCGAAAGACTGAAGTGACCGAAGACTTTTCTTGTCCGTTTTGCTTGATGCAGTGTGGGAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCGTCACATGATCTATTCAACTTTGAGTTTTGGGTTACTGAAGATTACCAAGCTGTGAATGTCTCtgtaaaaattgatatattgagATCAGAGAATACCGCTGATGGAGTAATTCCACAATCGCAAACCTTCTTCTTCTGTTCAAGACCTCGAAAACGTAGAAGAAAGGACtctgttcaaaatgaaaagcgCGCCAGTGTAAAATTCCTGGAGTTGGACTCACCAGAAGGCATACAGAATGGATTTGTACAAAAAGATGATGATGCCCTGTCCTGCAAAGGGGAGAATGTGTCTAGAGCATCCCGTAATGAGAAGATTTTGCCTAGTGGAAGAAATGATGGAGGAAAATTTGGCCCTGATCATCCTGGCACCACAGACGACCTGGAGCATGTTGAATCCAGTTTCAATATTCCAGGTGTTTCAATTGCCATGCCCCAATCTTCTGGGGATCCTGAATGTagtaaatcaatatataaaagtgaTCCTGCTCTGCCTGCTAAAACAAAGAAGCTAAGCATAGATCGATCAGACTCAAGAAACCGAATGCTTCTGCAGAAGAGACAGTTCTTTCACTCACACAGAGTCCAGCCCATGGCACTAGAACAAGTGTTAACAGACCGTGATAGTGAAGATGAAATTGATGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCAAAGGATGAAAAACAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAGCAAAGGGTGCTGGCTGATGGTCATGTTCCGTGGGCCTGTGAGGCTTTTTCCAAGCTTCATGGGAAAGAGCTGATCTCATCTCCAACTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAGCATAATATTAGATAGTTACAGAAATGAGGGATTGGATACTGGCAAAAATTAA 1299 0.4196 MGHCVSRRSLALLSPCVVDWVDGDRHLASPPPDLLIVATAADELLLGVLLRLSLSYTITARRKRRLRAEIVIFNYRDRYNMLRKTEVTEDFSCPFCLMQCGSFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENTADGVIPQSQTFFFCSRPRKRRRKDSVQNEKRASVKFLELDSPEGIQNGFVQKDDDALSCKGENVSRASRNEKILPSGRNDGGKFGPDHPGTTDDLEHVESSFNIPGVSIAMPQSSGDPECSKSIYKSDPALPAKTKKLSIDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLTDRDSEDEIDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELISSPTLFWCWRLFMIKLWNHGLLDACTMNNCSIILDSYRNEGLDTGKN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2705 432 PANTHER POLYCOMB GROUP PROTEIN 54 430 - -
Ssu2g2705 432 Pfam VEFS-Box of polycomb protein 282 417 IPR019135 -
Ssu2g2705 432 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 54 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2705 Ssu-Chr2 87295743 87322371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2705 65 420 C2H2 Transcription Factor Family AT5G51230 56.863 2.66e-121 364