Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2673 ATGTTAGGTACCCGATATGGTGCTAGTCTGCGGAAGCAGATTAAGAAGATGGAAGTTAGTCAGCACagcaaattcttttgtgaattttgtggAAAGTATGCTGTGAAAAGGAAGGCTGTGGGAATATGGGGATGCAAGGATTGTGGTAAAGTAAAAGCAGGCGGTGCATACACTTTGAATACTGCGAGTGCCGTCACTGTTAGAAGCACCATCCGGAGGTTGAGGGAACAAACTGAGGGTTGA 243 0.4198 MLGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2673 80 PANTHER 60S RIBOSOMAL PROTEIN L37A 3 79 - -
Ssu2g2673 80 SUPERFAMILY Zn-binding ribosomal proteins 3 70 IPR011332 GO:0006412
Ssu2g2673 80 TIGRFAM eL43_euk_arch: ribosomal protein eL43 3 79 IPR002674 GO:0003735|GO:0005840|GO:0006412
Ssu2g2673 80 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 3 79 - -
Ssu2g2673 80 Pfam Ribosomal L37ae protein family 3 76 IPR002674 GO:0003735|GO:0005840|GO:0006412
Ssu2g2673 80 Gene3D - 1 80 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2673 Ssu-Chr2 86934249 86934746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2673 3 80 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 93.590 7.31e-51 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2673 K02921 - gmx:100798254 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2673 2 86934249 86934746 Ssu2g2673 2 86934249 86934746 ECH