Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2668 ATGGTCTATGAATACATGGATAATGGTAGCTTAGAAGATAAATTATTCCGAAAAAATGACAGCTGGCCTTTTTCATGGAAGAAACGGTTCCAAATAGTTGTTGAGATTGCAACTGCACTCCTTTTCCTTCGCCAAAACAAGCTAGAGCCCATTGTGCACCGAAACCTTAAACCATCTAACATTCTCTTGGATAGGAATTACaAGAGTGTGggtacaaatttaaaatatatttga 234 0.3504 MVYEYMDNGSLEDKLFRKNDSWPFSWKKRFQIVVEIATALLFLRQNKLEPIVHRNLKPSNILLDRNYKSVGTNLKYI 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2668 77 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 69 - -
Ssu2g2668 77 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Ssu2g2668 77 SUPERFAMILY Protein kinase-like (PK-like) 1 67 IPR011009 -
Ssu2g2668 77 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2668 77 Pfam Protein tyrosine and serine/threonine kinase 1 66 IPR001245 GO:0004672|GO:0006468
Ssu2g2668 77 PANTHER OS02G0152300 PROTEIN 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2668 Ssu-Chr2 86817978 86820912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2668 1 69 Receptor kinase-like Gene Family AT5G12000 71.014 1.43e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Ssu2g2668 PK_Tyr_Ser-Thr 6.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2668 - - gmx:100798861 117.857