Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2647 ATGGAGCGTATGAGAGTTTTACTCATCTTCATTTCTATTTTGTCCAACGCTGCAACTCTAAGTGGCAGTGGATTTCTTGTTCATGACTACTACAAGGAGAAGTGTCCCTTAGCGGAAGACATCGTGAGACATAACGTGGAGGTGGCGGTTTTGAAAGATCCTCGTGTGGCAGCCTCGCTACTTCGCTTACACTTCCATGATTGTTTTGTCATGGGGTGCGATGCTTCGGTGCTTTTGGACAGCGTGGAGGGCATGACAAGTGAAAAGCTGGCCGGACCAAATCTGAACTCTTTACGTGGATTTGAGGTCGTAGACAAGATAAAGTATTTGCTGGAAGAGGAATGTCCTATCACTGTTTCATGTGCTGACATCCTGGCCATGGCTGCACGTGATGCTGTTGAATTGAGAGGAGGACCAAGATGGGAAGTCTTGCTAGGGAGAAAGGATTCTCTCGAGTCAAGTTTCAGTGGAGCTAACCTAGTCATCCCTGCTCCAAATTCCTCCCTAGAGGTTCTCATAGATAATTTTAAGCAACAAGGCCTTGACATAGAAGACTTGGTAGTTCTATCagGTAGCCATACTATAGGAAGAGCAAGATGTTTAAGCTTCAGGCAAAGGATATATGAAGCAAATGTTGAAAATCACTACGGCTATGATCACTATAAACGATACACAAGCTTCAGGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACAACAAATTTGCACCCCTGGATTTTCAAACCCCCAAAAGGTTTGATAACCACTACTTCATAAACATTCTCGAAGGGAAGGGCTTGCTAGGTTCTGATAATGTTCTGATCAGCCAGGACTTGGATGGAAAGATTACGCAGCAGGTGTGGGCTTATGCCTCCaaagaaaaacttttctttGCTTCATTTGCTAAATCTATGATTAAGATGGGAAACATCAATGTTCTCACTGGAAACGAAGGAGAAATTAGGAGGAATTGTAGTTTGTCAACGCTTAGTTGTTATGTATTGCATATGGTTTGTAATAGACTTATTGAGACCTAA 1044 0.4301 MERMRVLLIFISILSNAATLSGSGFLVHDYYKEKCPLAEDIVRHNVEVAVLKDPRVAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNLNSLRGFEVVDKIKYLLEEECPITVSCADILAMAARDAVELRGGPRWEVLLGRKDSLESSFSGANLVIPAPNSSLEVLIDNFKQQGLDIEDLVVLSGSHTIGRARCLSFRQRIYEANVENHYGYDHYKRYTSFRRILRSICPVEGRDNKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLISQDLDGKITQQVWAYASKEKLFFASFAKSMIKMGNINVLTGNEGEIRRNCSLSTLSCYVLHMVCNRLIET 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2647 347 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Ssu2g2647 347 PANTHER PEROXIDASE 20 5 329 - -
Ssu2g2647 347 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 Gene3D - 30 328 - -
Ssu2g2647 347 ProSiteProfiles Plant heme peroxidase family profile. 25 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 PANTHER PEROXIDASE 72-RELATED 5 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g2647 347 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Ssu2g2647 347 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu2g2647 347 Gene3D Peroxidase, domain 2 163 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2647 Ssu-Chr2 86397096 86398438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2647 85 327 Peroxidase AT2G35380 67.078 2.06e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2647 K00430 - gmx:100778051 615.15