Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2641 ATGTCTCCGGCCCGGAACACAGTTGCAGCTTTGTTGGGTGGATATGCATTTGTGTTTGGGTTTCTTAGGAGAGTGAATGAATGGTACAATGTCTTTAGGCTGGGAAAGATGCAACACCCTCTCCCATCTGGTAATCTGGGTTGGCCTTTCTTGGAGAACATGCTCCCCTTCCTCAAAGCTTTCAAGTCTGACACTGATTCCTTTATCTATAACCATGTTTCCAGGTCCCTTTTTCTCAGCCCACTTCTCTCTCCTAcagGCACGAAAGAAGTTGATGAAGCTGCTGCAGTGTcggaccaaaagaaaaagatcaaTGATACAAAAACAAAGATGAGGAAAGATATGACGGATTTATTGATGGAAGTCAAAGATGAAGACGGTAGGCAGCTGGAGGATGAAGACATTATAGCCTTAATTTTGGTATTCTTATTAGCTGGTCACGAAAGCTCTGCTCATGGCATATTGTGGACCATCATCTACTTCATGGAACACCCACATGTCTTCCAAAAGGCCAAGAAGGAACAAGGAGAGATCATGGAAACAAGACCTTCCACGCAGAAAGGGCTGAACCTTAAGGAATTAAGCAAATGGGATATCTTTCAAAGGTATgcaGTTATCGATGTGATGCTGCGCATAACAAGTATCTTGTTTGTGAACTTTAGACAGGCGAAGGTCGACGTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTAGTTTGGAGCCGAGAGGTTCACATGGATCCTGAAATTTACCACAATCCAAAGGAATACGATCCTTCCAGATGGGAAGTATCTATGAATCCAACCTGA 819 0.4164 MSPARNTVAALLGGYAFVFGFLRRVNEWYNVFRLGKMQHPLPSGNLGWPFLENMLPFLKAFKSDTDSFIYNHVSRSLFLSPLLSPTGTKEVDEAAAVSDQKKKINDTKTKMRKDMTDLLMEVKDEDGRQLEDEDIIALILVFLLAGHESSAHGILWTIIYFMEHPHVFQKAKKEQGEIMETRPSTQKGLNLKELSKWDIFQRYAVIDVMLRITSILFVNFRQAKVDVNINGYTIPKGWKVLVWSREVHMDPEIYHNPKEYDPSRWEVSMNPT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2641 272 Pfam Cytochrome P450 97 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 SUPERFAMILY Cytochrome P450 100 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 PANTHER CYTOCHROME P450 88D6 96 267 - -
Ssu2g2641 272 PANTHER CYTOCHROME P450 26 19 75 - -
Ssu2g2641 272 Gene3D Cytochrome P450 66 272 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 PRINTS B-class P450 signature 221 248 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 PRINTS B-class P450 signature 249 264 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 PRINTS B-class P450 signature 204 215 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2641 272 PANTHER CYTOCHROME P450 88D6 19 75 - -
Ssu2g2641 272 PANTHER CYTOCHROME P450 26 96 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2641 Ssu-Chr2 86312437 86315321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2641 11 75 Cytochrome P450 AT1G05160 46.970 1.70e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2641 K04123 - gmx:100775911 259.225