Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2640 ATGGTATTACTAGATTCAATGTGGCTCATCCTAGTTGGAGCTTTGTTGGGTGGATATGCATTTGTGTTTGGGTTTCTTAGGAGAGTGAATGAATGGTACTATGTTTCTAGGCTGGGAAAGATGCAACACCCTCTCCCGCCGGGTGATCTGGGTTGGCCCTTCTTGGGGAACATGCCCACCTTCCTCAAAGCTTTCAAGTCTGACCCTGATTCCTTTATCTATGACCTTGTTTCCAGATACGGCAGGACGGGTATGTACAGGACGTTCTTGATTGGGAGCCCGAGCATCATAGTTTGCACCCCAGAGACATGTCGTAAGGTTCTGACAGATGATGAACAATTCAAGCTTGGATACCCTGCTTCCACCATGGCCCTGACAGGAAAGAGATCATTCCATGGCATCTCAAATGTGGAACACAAGCGTCTTCGCCGCCTAACCATGTCTCCCATAACTGGCCATGAGGCATTGTCTACGTACGTAGGTCTCATAGAAGGTGCTGCTGTGAAACTGTTGGAAGAGTTGTCCAGCATGAACACGCCTTGTGAGTTCCTCGCAGAGATGAGGAAGTTCGCTTTTAAGGTCATCACCACCATCTTCATGGGCTCGGATGCTGACCGTGTGGACTTTGGCCTCGTTGAAAACTTGTACACAGATTTGAATCGGGGACTAAAGTCACTGGCGATCAATCTCCCAGGCTTTGCATTCTATAAAGCACTCaagGCACGAAAGAAGTTGATGAAATTGCTGCAAGGCTTGGTGGACCAAAAGAGATGgagaaataatacaaaaaccAAGACGAAGAAAGATATGATGGATTTATTGATGGAAGTCAAAGATGAGGACGGTAGGCAGCTGGAGGATGAAGACATTAGAGACTTACTTCTGGTATTCTTGTTAGCTGGTCACGAAAGCTCTGCTCATGGAATACTGTGGACCATCATCTACCTCATGGAACACCCACATGTCTACCAAAGGGCGAAGAAAGAACAAGAAGAGATCATGGAAACAAGACCTTCCACGCAGAAAGGGCTGAACCTTAAGGAAATTAGGCAAATGGAATATCTTTCAAAGGTTATCGATGAGATGCTGCGCAGAACATGTATCTCGTTTGCGAACTTTAGACAGGCAAAGGTCGATGTCAACATCAATGgTTATACTATACCGAAAGGATGGAAAGTTCTAGTTTGGATTCGAGGGGTTCACATGGATCCTGAAACTTACCACAATCCAAAGGAATACGATCCTTCCAGATGGGAAAATCACAGAGCAAGAGCAGGTTCTTTCCTTCCGTTTGGATTAGGAAGCAGGTTTTGTCCCGGGAGCGACTTGGCCAAACTTAAGATCACCATTTTCctccatcattttcttcttaaCTATAGGATGGAGAGAATTAATCCAGATTGTCCAGTCACTTACCTACCATTGCCAAGGCCTTCGGACAACTGCCCTGCAAGAATTATAAAAGCCACATAA 1473 0.446 MVLLDSMWLILVGALLGGYAFVFGFLRRVNEWYYVSRLGKMQHPLPPGDLGWPFLGNMPTFLKAFKSDPDSFIYDLVSRYGRTGMYRTFLIGSPSIIVCTPETCRKVLTDDEQFKLGYPASTMALTGKRSFHGISNVEHKRLRRLTMSPITGHEALSTYVGLIEGAAVKLLEELSSMNTPCEFLAEMRKFAFKVITTIFMGSDADRVDFGLVENLYTDLNRGLKSLAINLPGFAFYKALKARKKLMKLLQGLVDQKRWRNNTKTKTKKDMMDLLMEVKDEDGRQLEDEDIRDLLLVFLLAGHESSAHGILWTIIYLMEHPHVYQRAKKEQEEIMETRPSTQKGLNLKEIRQMEYLSKVIDEMLRRTCISFANFRQAKVDVNINGYTIPKGWKVLVWIRGVHMDPETYHNPKEYDPSRWENHRARAGSFLPFGLGSRFCPGSDLAKLKITIFLHHFLLNYRMERINPDCPVTYLPLPRPSDNCPARIIKAT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2640 490 SUPERFAMILY Cytochrome P450 43 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PANTHER CYTOCHROME P450 26 23 467 - -
Ssu2g2640 490 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Ssu2g2640 490 PANTHER CYTOCHROME P450 88D6 23 467 - -
Ssu2g2640 490 Pfam Cytochrome P450 46 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 Gene3D Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g2640 490 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2640 Ssu-Chr2 86294634 86298386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2640 25 486 Cytochrome P450 AT1G05160 55.914 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2640 K04123 - gmx:100775911 707.597