Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2637 ATGGGAAGCAATGGACTGTGCAACCTCTTTTCCTGCTTCAAAGCCTCCAACCACAGCCCTAATCAACAACACCAACTCGTCTTCGCTGAGACCGAGCCTCCATTGGACGAAACCCTCGGCCACTCCTTCTGCTACGTTAGATCTTCGGCTCGCTTTCTGTCCCCCTCCCATTCCGATCGCCTCCTCTCCCCCTCCAACTCCCTCCGCTTCTCCCCCTCCCACCGCCCCGATTTCCCCGAGACCGCATTCAAGGCCATTTCCGGCGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAAAACCGTCCTCCAGTCCGACGATGACACCACCGTAAACGGCTTCAAAGGAACGTCGTCGTTCAGCGCCCTCCCGCTCCAGCCGGTCCCacgaggaggaggaggagcCGAAACCGTTCCCTCCGAGAGAGAGAGGAGGGCGTTCTTCCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCCGGACCCCTCGACGACGCCGTTTCCACCTCCGCGGGAGTGCCTTTCTCCGCTCCGCTCGGGGGCGGAGTCTACGTCAAGAAGAAGAAGCGGAAGAAGACCATTGCGGGGCTGCGGAAGGCCTTCCAGCGGAGCTTGTCGGAGAAGAAGCGCCCCTGGGTGGTGCCGGTGGGCCGCAAGGGGAAGACCGAGGCCAAGACCGAGAGCAATGTGCAGTGGGCGCTCGGAAAAGCCGGGGAGGATCGTGTGCACGTGGTTGTATCGGAAGAGCAGGGCTGGTTGTTCGTTGGGATTTACGACGGCTTCAACGGCCCCGACGCGCCCGAGTTTCTCATGGGTAATCTTTACCGCGCCGTTCACAAGGAGCTCCAGGGTTTGTTTTGGGAACCTGAAGACAATCAGGAGCCGCAGGAACAGGGAACTAACCCTACACCCAATGAGGGGGAGGTTGAAGAAGATACCAACTCTCTTCAAGGATCTGTTAAGAGAGTAACGTTTCAAGCGGAGGGAACTGAGAGCAGGAGGCGAAGGTTGTGGGAGTTTCTTGCTGAGgatgatgatgctgaggacggGCTCGATCTCTCGGGGTCGGATAGGTTTGCGTTTTCCGTGGATGAAGCACTTAGTGTTAGCAAGGAGGGTTCGGGAGGGAGTAGGCGCTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCATAAGGAGGGGCATGGGAGAAGGTTGTTGCCCTGGAGCTTGGGCGTGGGggcggaggaggaggaggaggagaaggttgaggTGGAGAATCCGGCGGGGGCGGAGGAGAAGTATCGCGGTGGGAGGAAGCGGAAGGTGGGGCCTGTGGATCATGAGTTGGTTTTGAGGGCGTTGTCTCGGGCGCTTGAGATGACTGAGCTTGCGTATTTGGATATGACGGATAAGCTTATTGATACCAATCCGGAGCTTGCTTTGATGGGGTCGTGTCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTGATGAACGTGGGGGATAGCCGCGCCATTGTGGCGCATTATGAGTGCGGTAAGGAAACGGGAAGCAGTGGTGGGGATATTGGGTCAAGCGGGGAGAGCATAGTGGAGGAGTCCTTGGCTCCGGATGAGGGTCGTGTCGTGTTGGGGAATGAGGGTCCTGCTCAGGAAAGGAGGTTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTGTTAGGATAAAGAATGAACATCCTGATGATAGCCAATGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAAGTTACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTAGTACTAGAAATGTTTCGTAATAAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCATTACGACACCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTATCATCTGATGGGTTGTATCAATATCTAAGCAATGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCGGATGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTTCTACGTGCAGCCAAAAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATTCCTCAAGGAGATCGAAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAGTATCTGTGA 2199 0.5189 MGSNGLCNLFSCFKASNHSPNQQHQLVFAETEPPLDETLGHSFCYVRSSARFLSPSHSDRLLSPSNSLRFSPSHRPDFPETAFKAISGASVSANSSVPKTVLQSDDDTTVNGFKGTSSFSALPLQPVPRGGGGAETVPSERERRAFFLSGPIESGALSGPLDDAVSTSAGVPFSAPLGGGVYVKKKKRKKTIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEAKTESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVHKELQGLFWEPEDNQEPQEQGTNPTPNEGEVEEDTNSLQGSVKRVTFQAEGTESRRRRLWEFLAEDDDAEDGLDLSGSDRFAFSVDEALSVSKEGSGGSRRWLILSKLKHGLSRHKEGHGRRLLPWSLGVGAEEEEEEKVEVENPAGAEEKYRGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECGKETGSSGGDIGSSGESIVEESLAPDEGRVVLGNEGPAQERRLVALQLSTDHSTSIEEEVVRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNKYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2637 732 MobiDBLite consensus disorder prediction 287 325 - -
Ssu2g2637 732 MobiDBLite consensus disorder prediction 291 324 - -
Ssu2g2637 732 CDD PP2Cc 440 720 IPR001932 -
Ssu2g2637 732 PANTHER PROTEIN PHOSPHATASE 2C 23 730 IPR015655 GO:0004722|GO:0006470
Ssu2g2637 732 SUPERFAMILY PP2C-like 233 721 IPR036457 -
Ssu2g2637 732 SMART PP2C_4 221 718 IPR001932 -
Ssu2g2637 732 Pfam Protein phosphatase 2C 536 688 IPR001932 -
Ssu2g2637 732 PANTHER PROTEIN PHOSPHATASE 2C 29 23 730 - -
Ssu2g2637 732 Gene3D - 196 727 IPR036457 -
Ssu2g2637 732 ProSiteProfiles PPM-type phosphatase domain profile. 216 720 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2637 Ssu-Chr2 86252922 86257266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2637 1 732 PP2C-type Phosphatase Gene Family AT2G35350 56.074 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2637 - - gmx:100775371 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2637 2 86252922 86257266 Ssu6g1725 6 29063218 29067555 PCT