Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2610 ATGGCTATCACCTGGTCTGGTTCTCAAAACATTATAAAGAGAATGCTTGATCCCAATCCGAAAACCCGGATAACAATGGCTATGATAAAAAGAGATGAATGGTTCAAGGAGGGTTATACTGCCGCAAATCCAGAAGATGAGGAAGAGAATGTGTATATTGATGATGAAGCCTTTTCCATCCATGATGAGTCACTTGAACCAGATCAGGGGAGTCCAAGATCACCAACACTTATCAATGCGTTTCAGTTGATAGGAATGTCTTCAAGCCTAGATCTCTCTGGCTTTTTTGAGAAAGAGGTGAGGATAAGAGGATGGAAGTTTATTGGCACTTGGCAGGAcacatatttgttatattttgagCATAATTTCCTATGTTTTAACTTCTAA 387 0.3798 MAITWSGSQNIIKRMLDPNPKTRITMAMIKRDEWFKEGYTAANPEDEEENVYIDDEAFSIHDESLEPDQGSPRSPTLINAFQLIGMSSSLDLSGFFEKEVRIRGWKFIGTWQDTYLLYFEHNFLCFNF 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2610 128 Pfam NAF domain 75 100 IPR004041 GO:0007165
Ssu2g2610 128 Gene3D Kinase associated domain 1, KA1 78 114 - -
Ssu2g2610 128 PANTHER CBL-INTERACTING PROTEIN KINASE 21 6 116 - -
Ssu2g2610 128 ProSiteProfiles NAF domain profile. 73 97 IPR018451 GO:0007165
Ssu2g2610 128 Gene3D Transferase(Phosphotransferase) domain 1 4 77 - -
Ssu2g2610 128 SUPERFAMILY Protein kinase-like (PK-like) 9 39 IPR011009 -
Ssu2g2610 128 PANTHER - 6 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2610 Ssu-Chr2 85716918 85717413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2610 7 99 CBL-interacting serine-threonine protein kinases AT1G48260 53.763 3.33e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2610 K07198 - gmx:100815660 163.31