Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2609 ATGAGCTACTTGTCTTCACAGGCATCCACAGGTACGAAGATATTCCAACAGTTGATTGATTGTGTGAGCTTCTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTAGAGAATGTACTTGTGGATGCCAAAGGGAGCATAAAGATAACCGATTTTAACCTTAGTGCTTTGCCCCAGCATTTTAGGGCAGATGGGTTGCTGCATACAACTTGTGGAAGCCCCAATTATGTTGCCACTGAGATTCTTGCCAATAAAGGCTATGATGGTGCAATATCAGATATATGGTCATATGGGGTTATCTTGTATGTAATTCTAGAAGGATACCTTCCTTTTGATGACAGAAATCTTGCTGTTCTCTATCAAAAGttttataaactaaatattattttcttttcgaCGAGGATCACAGATTTTTAA 420 0.381 MSYLSSQASTGTKIFQQLIDCVSFCHNKGVFHRDLKLENVLVDAKGSIKITDFNLSALPQHFRADGLLHTTCGSPNYVATEILANKGYDGAISDIWSYGVILYVILEGYLPFDDRNLAVLYQKFYKLNIIFFSTRITDF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2609 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2609 139 Gene3D Transferase(Phosphotransferase) domain 1 3 137 - -
Ssu2g2609 139 SUPERFAMILY Protein kinase-like (PK-like) 13 127 IPR011009 -
Ssu2g2609 139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Ssu2g2609 139 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 129 - -
Ssu2g2609 139 PANTHER SERINE/THREONINE KINASE 9 129 - -
Ssu2g2609 139 SMART serkin_6 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g2609 139 Pfam Protein kinase domain 9 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2609 Ssu-Chr2 85715940 85716896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2609 11 126 CBL-interacting serine-threonine protein kinases AT3G17510 83.621 1.88e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ssu2g2609 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2609 K07198 - gmx:100780524 223.787