Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2597 ATGGCAAACAATGAGAAGAAGCAAGAGGAGAAGGATTTTGACTATGTCGAGAGGGCACGACTCAGAGCAGCTGTTTTTGCTGCCAATGATGGGTTGCTCTTCACAACATGCCTCATGTTGTCAGTTGGAGTTGTGACAGAGGATGTTAAGAGCATAATGCAAATTGGGGTTGCGGGCTTGGTGTCCGGGACTTGCGGGAGGGCCTTTGATTTTTCTGATCCATCACATGATATTGAGTTCTTTCAGACGGAAGACAAAGAGAAATTGTCGAACCTTGCCTCTGCCCTTGCGTTTGCCCTTGGGGCAGCGGTGCCAGTACTTGCTGCGGCGTTTGTCGATACTTATAAGAGGAGGTTGGGAATGGTAGTGGCTGTTGTGACCCTTACCTTGATTGGGTTTGGAGGTCTGGATGCCTTTTTACTTAAAGCACCCAGTGTGAAGAATTGCATTTTGAGGATTTTGATTGCGGGATGGATAGGCATGGCACTTGCTGTTGGTTTAGCAAAGCTTGTAGATCATGTTGGAAATTTTTCTACGTAG 540 0.4685 MANNEKKQEEKDFDYVERARLRAAVFAANDGLLFTTCLMLSVGVVTEDVKSIMQIGVAGLVSGTCGRAFDFSDPSHDIEFFQTEDKEKLSNLASALAFALGAAVPVLAAAFVDTYKRRLGMVVAVVTLTLIGFGGLDAFLLKAPSVKNCILRILIAGWIGMALAVGLAKLVDHVGNFST 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2597 179 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 5 172 IPR008217 GO:0005384|GO:0030026
Ssu2g2597 179 Pfam VIT family 90 168 IPR008217 GO:0005384|GO:0030026
Ssu2g2597 179 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 5 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2597 Ssu-Chr2 85373310 85373849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2597 6 175 Nodulin-like Gene Family AT3G43660 48.387 2.67e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2597 K22736 - gmx:121175311 147.517