Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2586 ATGGCTGGTAGTACCTCAAAGCCAGTGATATGTGTGGGAAGCCAGGGACAAACTTGGGTTTCCCATGGCGACACTCCCCAGTTCTTCAATGTTGTTTCAAGAGTGGGAATTGGAAGGCTCAGTCGTTGTTGTACTTTCAGGTTAGAAAAGACCAAAACGGCTGCGTTTTCGGTGAGAGGCTGCGGATGTGACCAAAATAGCAGCGACGAGGACTTTGGCGTGACGGAAGAAGACCAAGAGTTCGTGAAGGTTCTGAGGGAATCTCAACCATACTTTTCGGTGCATAGGGACAGAGTATTCGTTGTGATCATATCTGCAGAACTTGTTGCTAGTCCTTACTTGGATCCCATTCTCAAGgATATAGCTTTCCTTCATCACCTTGGAATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAAATAGACAAGCTTTTGAATGAGAGAGGGTGCCGGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAGGAATCTCTAGAAGCTGCGATGGAAGCAGCTGGGGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAGTATTCGTCGACACGGTGACAATAGTCGATGGCATGACGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAGGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCACTGGAGAAGTATTAAATTGCAAcACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTAATATGCCTTATAGATGGTCCAATACTTGATGAGAGTGAACGCCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGTTGATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAACTCGCTTGAGCATAACAATTTTAATGGAACAGTCAAATCATCCTCCAATGGACGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTCGAGAATGGAAATGGCTTTGGGTCTAGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGAATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACGATGGTGGCTAGCGACCTTTACGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTACGAACATTGGATTCATTCATTGTTGTGGAGAGAGAAGGTCATATAATTGCTTGTGCTGCCCTTCTTCCTCACTTTGAGGAGAAGTGTGGAGAGGTTGCTTGCATTGCAGTATCTCCTGACTGTCGGGGTCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTACCTGCTTACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGCATGTTCAATTGATTATATTCCTGAAAGGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATTACTGTTGGTGTAAATTCTGCTTGTAGTTAG 1827 0.4368 MAGSTSKPVICVGSQGQTWVSHGDTPQFFNVVSRVGIGRLSRCCTFRLEKTKTAAFSVRGCGCDQNSSDEDFGVTEEDQEFVKVLRESQPYFSVHRDRVFVVIISAELVASPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCRPKYVGRYRITDEESLEAAMEAAGGIRLMIEAKLSPGPSICSIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSTGEVLNCNTYEVATACALAIGADKLICLIDGPILDESERLIRFLPLQEADMLIRKRAEQSEAAANYVKAVDEEGFNSLEHNNFNGTVKSSSNGRFTEWHNATFHNGVGFENGNGFGSSEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLNGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDEELLRTLDSFIVVEREGHIIACAALLPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLYLLTTRTADWFVRRGFSACSIDYIPERKRRMINLSRNSKYYMKKLLPNKSGITVGVNSACS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2586 608 Pfam Acetyltransferase (GNAT) family 483 551 IPR000182 GO:0016407
Ssu2g2586 608 CDD NAT_SF 487 549 - -
Ssu2g2586 608 SUPERFAMILY Carbamate kinase-like 394 442 IPR036393 -
Ssu2g2586 608 Gene3D - 79 445 IPR036393 -
Ssu2g2586 608 Hamap Amino-acid acetyltransferase [argA]. 75 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Ssu2g2586 608 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 400 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Ssu2g2586 608 SUPERFAMILY Carbamate kinase-like 77 316 IPR036393 -
Ssu2g2586 608 CDD AAK_NAGS-ABP 80 440 IPR033719 -
Ssu2g2586 608 Gene3D - 446 592 - -
Ssu2g2586 608 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 74 602 - -
Ssu2g2586 608 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 449 596 IPR016181 -
Ssu2g2586 608 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 446 594 IPR000182 GO:0016407
Ssu2g2586 608 Pfam Amino acid kinase family 113 322 IPR001048 -
Ssu2g2586 608 PANTHER AMINO-ACID ACETYLTRANSFERASE 74 602 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2586 Ssu-Chr2 85195834 85204744 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu2g2586 AA_kinase 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2586 K14682 - gmx:100777694 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2586 2 85195834 85204744 Ssu6g1776 6 30354329 30374822 PCT