Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2566 ATGGGTGAGGAGCTAACGCCTACGGTGATTGTGAGAGTGTTCGTCCCGAATAAAGACAGAGAGAGAGTAGAAGCCGTTGAAAGGATATGTGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGACATGCTCGGTGACCCAATTTGCAGGGTCCGCAATTCGCCTGCTTTTCTCATGCTGGTGGCGGAGATTGGCGAAGAGATAGTGGGAATGATAAGAGGTTGCATAAAAACCGTCGCATGCGGGAAAAGGCTCTCCAGAAACGGAAAACACGACACTAACGCGAAACACGTCCCAGTGTACACCAGAGTCGCCTACATATTAGGCCTTCGTGTTTCTCCTAATCAACGGAGAATGGGAATAGGGTCGAAGCTAGTGCAGAGAATGGAGGCGTGGTTTAGAGATAATGGCGCTGAGTACTCCTACATGGCAACGGAAAACGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAGGTTCCGTACTCCGTCCGTCCTTGTCAACCCCGTTTTCGCCCACCGAGCCAGGGTGTCCCCAAAGGTCACCATCATTAACCTTTCCCCTTCCGACGCCGAGGTTCTCTACCGTCGCCGCTTCGCCACGACGGAGTTCTTCCCGCGCGACATTGACTCCGTTCTCAACAACAAGCTCAGCCTGGGCACCTTCCTGGCCGTCCCGCGCGGGTCCTACAGGGCCGAGACATGGCCCGGCCCAGATCTTTTCCTGTCGGACCCACCGCGCTCTTGGGCCCTGGCCAGCGTGTGGAACTCGAAGGAGGTGTTCACGCTCGAGGTGCGTGGCGCGTCGCGCGTGAAGCGCACGCTAGCGAAGACGACGCGGGTGGTGGACCGGGCCCTGCCGTGGCTGCGGTTACCGTCGATCCCGGATTTGTTCAGGCCGTTCGGGTTTCACTTCATGTACGGGCTGGGAGGGGAAGGCCCAGAGGCCGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCACAACCTCGCCATGGACAAAGGGTGCAGGGTGGTGGCCACCGAGGTGTCCCCAAACGAGCCCTTGCGGTGCGGGATACCCCACTGGAAGATGCTGTCGTGTGAGGAAGATTTATGGTGTATGAAGAGGTTGGGCGAAGATTACAGTGATGGTTCCCTGGGTGACTGGACCAAGTCTCCACCCGGCATGTCCATTTTTGTTGACCCAAGAGAGGTCTAA 1218 0.5673 MGEELTPTVIVRVFVPNKDRERVEAVERICEVGPSGKLSLFTDMLGDPICRVRNSPAFLMLVAEIGEEIVGMIRGCIKTVACGKRLSRNGKHDTNAKHVPVYTRVAYILGLRVSPNQRRMGIGSKLVQRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYSRFRTPSVLVNPVFAHRARVSPKVTIINLSPSDAEVLYRRRFATTEFFPRDIDSVLNNKLSLGTFLAVPRGSYRAETWPGPDLFLSDPPRSWALASVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRLPSIPDLFRPFGFHFMYGLGGEGPEAVKMVKALCGFAHNLAMDKGCRVVATEVSPNEPLRCGIPHWKMLSCEEDLWCMKRLGEDYSDGSLGDWTKSPPGMSIFVDPREV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2566 405 PANTHER N-ACETYLTRANSFERASE 9 404 - -
Ssu2g2566 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 190 IPR000182 GO:0016407
Ssu2g2566 405 CDD NAT_SF 60 141 - -
Ssu2g2566 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 166 IPR016181 -
Ssu2g2566 405 Pfam Acetyltransferase (GNAT) family 56 163 IPR000182 GO:0016407
Ssu2g2566 405 Gene3D - 40 169 - -
Ssu2g2566 405 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2566 Ssu-Chr2 84909968 84911453 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu2g2566 Acetyltransf_1 6e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2566 - - gmx:100800613 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2566 2 84909968 84911453 Ssu6g1792 6 30636179 30636988 PCT