LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu2g2550	ATGAAGGTGGGTGCGCTCCCTGAGGAGGATTCTGAAGATGGTAGTGGGGGCAAAGCAGAAATGCTCTACACCTATGACAATGCGATTCATGCATTCTCAACAAGATTAACATCTGAAGAAGCCAGGTTACTAAAGAGCCAAACCGGGATTCTAAAGGTGCTACCGGAGAAAATATACAAGCCACTCACAACTCGAACACCACACTTCCTTGGGCTCGATAAAATTGTTGATATGTTCCCCGAATCAAATGCGGGAAGTGACATCAATATCGGATTCCTCGACACTGGTGTTTGGCCCAAAAGCAAGAGCTTCGACGATACCGAACTAGGACCCATTTTTTTGGTTAAGGAGACATGA	357	0.4566	MKVGALPEEDSEDGSGGKAEMLYTYDNAIHAFSTRLTSEEARLLKSQTGILKVLPEKIYKPLTTRTPHFLGLDKIVDMFPESNAGSDINIGFLDTGVWPKSKSFDDTELGPIFLVKET	118

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu2g2550	118	Pfam	Peptidase inhibitor I9	15	60	IPR010259	-
	Ssu2g2550	118	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	18	112	-	-
	Ssu2g2550	118	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	18	112	IPR045051	-
	Ssu2g2550	118	Gene3D	Peptidase S8/S53 domain	63	115	IPR036852	GO:0004252\|GO:0006508
	Ssu2g2550	118	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	6	61	IPR037045	-
	Ssu2g2550	118	SUPERFAMILY	Subtilisin-like	25	104	IPR036852	GO:0004252\|GO:0006508

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu2g2550	Ssu-Chr2	84635307	84639742	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu2g2550	18	112	Subtilisin-like Serine Gene Family	AT5G67360	60.417	2.27e-33	120

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu2g2550	-		-	gmx:100801866	160.999

Showing 1 to 1 of 1 entries