Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2549 ATGTTTAGCATGGAGGCGTTTAAGAAACCTTTCTTTgcaactatttttgttttgtttgtggtCGTTTGCGATGTTTCTCTGGCGACAATTGAGAAAACAACAGAGAACCGGAAGAGTACTTACATAGTCCACGTGGCCAAATCCGAAATGCCAGCAAGCTTAAATCACCATTCAGTCTGGCATAAATCGATTATGAAATCGATATCCAATTCAGCAGAAATGCTCTACACCTATGACAACGCGATTCATGGATTCTCAACGAGATTAACACCTGAAGAAGCTCGGTTACTGAAGAATCAAACCGGAATTCTAAAGGTGCTACCAGAGAAAATATACAAGCCACTCACAACTCGAACACCACACTTTCTCGGGCTGGATAAAATCGCGGATATGTTCCCAGAATCAAACATGGGATATGACACCATTATCGGACTCCTAGACACGGGTGTTTGGCCCGAAAGCAAGAGCTTCGACGATGCCGGAATGGGACCCATCCCTAGTAGCTGGAGAGGCAAATGTGAATCAGGTGACAATTTCACTGCCTCGAACTGCAATAAGAAATTGATAGGAGCCAGGTTCTTCCTAAAAGGCTACGAGGCCACAAATGGTCCCCTTAATGAAACCAACCAATCCAGATCACCACGAGACGTTGACGGCCACGGCACCCACACTGCAAGCACAGCCGCAGGGTCTGCAGTGGAAGGCGCGAGCCTATTCGGCTACGCTTCCGGGACGGCACGTGGGATGGCCTCACGTGCTAGAGTCGCTGTCTACAAGGTTTGTTGGGAAGATAAATGTGCTGCTTCTGATATATTGGCAGCAATGGACACAGCCATCTCTGACAACGTCCATGTCATTTCAGCATCACTTGGAGGTGGAGCAGTTGATTACGACGAAGAAAACCTCGCAATTGGAGCCTTTGCAGCAATGGAGAAAGGGATTATAGTTTCCACTGCTGCAGGAAATGATGGGCCTTCTCACTTTTCTCTCCAGAATGTAGCACCTTGGATGATCACCGTGGGAGCTGGCACGCTAGATCGTGATTTCCCAGCATACGTTAAACTCGGGAATGGACAAAACTATTCTGGAGTGTCAATTTATGATGGTAATTCTTTTCCCAAAAATTCTTATTCATTCATATACGCAGGGAATGCAAGCGCAAAATTAGGTGCGAAGGTGTGTGAGACAGATAGCTTGGATCCAGAAAAGGTTAAGGGGAAAATTGTGCTGTGTGATCGTGGAGATAATTCTAGAGTAGAGAAAGGACTTGTGGTGAAATTAGCCGGCGGTGTGGGCATGGTGTTGGCCAATGCGGAATCCGATGGAGAGGAATTGGTGGCGGATGCCCATGTTTTGCCAGCAGCTGCAGTGGGTTTCAAGGCCGGGAAAGCCATCAAGATGTACTTGTCATCTGCTCGAAAACCAACAACAGCTACGCTTGTGTTTCACGGAACGATGGTCGAGATATTGAAGCCTGATTTCATTGCTCCTGGTGTCAATATCTTAGCGGCATTTACAAAGCTTGCGGGTCCCACTAACCTCGCCCAAGATGATAGGCGCGTGGACTTCAACATAATCTCAGGCACATCCATGTCATGCCCTCACGCAAGCGGTGTAGCGGCTTTGATCAAGTCGGTTTATCCAAATTGGAGCCCAGCCGCGGTTCGGTCTGCGCTAATGACCACAGCTTATACGACTTACAGCAACGGTCAGAAATTGCTAGACAGTGCCACACACGGCCCGTCAACACCGTTTGAAGTCGGTGCTGGACATGTGAACCCTGTTGCTGCGCTTAATCCAGGACTCGTTTATGATTTGACAGCTGATGATTATCTCAACTTCCTTTGTGCGTTAAACTACACACCTGAGAGAATCGAGGCTGTGGCGAGGAGAAAGTACAAGTGCCTGGCACATGAACAATACAGTGTAACGGACCTAAATTACCCTTCCTTTGGTGTGGTATTTAAACCAACAGCGGGTGGATACGGCGAAACGACTGTTAAACACAGGCGGACTCTTACTAATGTGGGGGCCGAAGGAACATACAAGGTATCATTTTCGTTGGATATCCCATCTGTCAAGATCACAGTTGAGCCAAACGTGTTGAGCTTcaacaaaaatgagaaaaaatcatTCACAGTCACGTTTACGACATCAGATTCACCACCACcgagtaattttagttttggacGTTTAGAATGGTCAAATGGAAAGAATGTTGTGGGAAGTCCTATCTCAATTGCATGGGGCTCGGGACGTGATTGA 2265 0.4614 MFSMEAFKKPFFATIFVLFVVVCDVSLATIEKTTENRKSTYIVHVAKSEMPASLNHHSVWHKSIMKSISNSAEMLYTYDNAIHGFSTRLTPEEARLLKNQTGILKVLPEKIYKPLTTRTPHFLGLDKIADMFPESNMGYDTIIGLLDTGVWPESKSFDDAGMGPIPSSWRGKCESGDNFTASNCNKKLIGARFFLKGYEATNGPLNETNQSRSPRDVDGHGTHTASTAAGSAVEGASLFGYASGTARGMASRARVAVYKVCWEDKCAASDILAAMDTAISDNVHVISASLGGGAVDYDEENLAIGAFAAMEKGIIVSTAAGNDGPSHFSLQNVAPWMITVGAGTLDRDFPAYVKLGNGQNYSGVSIYDGNSFPKNSYSFIYAGNASAKLGAKVCETDSLDPEKVKGKIVLCDRGDNSRVEKGLVVKLAGGVGMVLANAESDGEELVADAHVLPAAAVGFKAGKAIKMYLSSARKPTTATLVFHGTMVEILKPDFIAPGVNILAAFTKLAGPTNLAQDDRRVDFNIISGTSMSCPHASGVAALIKSVYPNWSPAAVRSALMTTAYTTYSNGQKLLDSATHGPSTPFEVGAGHVNPVAALNPGLVYDLTADDYLNFLCALNYTPERIEAVARRKYKCLAHEQYSVTDLNYPSFGVVFKPTAGGYGETTVKHRRTLTNVGAEGTYKVSFSLDIPSVKITVEPNVLSFNKNEKKSFTVTFTTSDSPPPSNFSFGRLEWSNGKNVVGSPISIAWGSGRD 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2549 754 CDD PA_subtilisin_like 352 477 - -
Ssu2g2549 754 Pfam Peptidase inhibitor I9 40 113 IPR010259 -
Ssu2g2549 754 Gene3D - 346 481 - -
Ssu2g2549 754 CDD Peptidases_S8_3 112 564 IPR034197 -
Ssu2g2549 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 750 IPR045051 -
Ssu2g2549 754 Gene3D Peptidase S8/S53 domain 488 611 IPR036852 GO:0004252|GO:0006508
Ssu2g2549 754 Gene3D Peptidase S8/S53 domain 140 345 IPR036852 GO:0004252|GO:0006508
Ssu2g2549 754 Pfam PA domain 394 465 IPR003137 -
Ssu2g2549 754 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 28 750 - -
Ssu2g2549 754 MobiDBLite consensus disorder prediction 204 228 - -
Ssu2g2549 754 Pfam Subtilase family 140 571 IPR000209 GO:0006508|GO:0008236
Ssu2g2549 754 Pfam Fibronectin type-III domain 645 747 IPR041469 -
Ssu2g2549 754 Gene3D - 615 749 - -
Ssu2g2549 754 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Ssu2g2549 754 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Ssu2g2549 754 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Ssu2g2549 754 ProSiteProfiles Serine proteases, subtilase domain profile. 122 598 - -
Ssu2g2549 754 SUPERFAMILY Subtilisin-like 115 602 IPR036852 GO:0004252|GO:0006508
Ssu2g2549 754 SUPERFAMILY PA domain 396 471 IPR046450 -
Ssu2g2549 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Ssu2g2549 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2549 Ssu-Chr2 84628467 84630795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2549 13 749 Subtilisin-like Serine Gene Family AT5G67360 61.024 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2549 - - gmx:100801866 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2549 2 84628467 84630795 Ssu6g1815 6 31175904 31178183 PCT