Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2547 ATGTTGGAGCTGTGGCGCAAGCCACTGGAGATGTGCTTTGGTGGTGGAGGCAACGATGATGACCTCCTCTGGCACACGGACCTGAAGCCCCACGCTTCAGGAAACTATTCAATTGCAGTGGTACAAGCTAATTCTTCCTTAGAAGACCAAGCACAGGTATTTACCTCTCCGTCCGAAACCTTTGTTGGCGTATACGACGGACACGGTGGACCCGAAGTTTCCCGTTTCATCACCAACCATCTCTTCTCCTTCCTTCGCAAGTTCGCGACAGAGGAAGGTGGTTTGTCGGAGGAGGTGATAAAGAAGGCGTTCGAGGCAACCGAAGAGGAGTTTTTGCGTTTAGTGAAGCAGTCGTGGATTGCACGGCCACAGATTGCTTCGGTGGGTTCGTGCTGTCTTCTGGGAGCGATTTCAAACGACGTTCTTTATGTTGCTAATCTTGGGGATTCGAGGGCGGTTTTGGGTCGGAAAGCGTTGGAAGGAGAGGTGAATTGTGGTCCTGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAGGAGGTCAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGCACACATTGTGGTTTGCACTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTATACCTCAAGAAACCAGAATTTGACACTAATCCTCTGTTCCAACAATTTGTATGTCCACTATACTTGAAGAGACCTGTAATGACAGCTGAACCATCGATATTGACGCGGAAATTGAAGGCAGATGATCTGTTTTTGATCTTTGCTTCAGATGGACTTTGGGAGCATTTAACTGATGAAGCGGCTGTTGAAATCATCTTCAGAAGTCCCAGAATAGGAATAGCAAAACGATTGGTTAGAGCTGCACTAGAAGAGGTTGCAAAGAAAAGAGATATGAGATATGAGGATATAAGGAAAATTGAGAAAGGTCTAAGGCGCCATTTTCATGATGATATTACGGTGATCGTTCTATATCTCGATCATTCACAAGAATCTCTAAGTGGTAGGTCAAGACATCAAGGAGTTTATGATTGCATTAATACTCCTATTGATATCTTCTCTCTGGGAGCAGCTGAAGCTgatctttaa 1128 0.4566 MLELWRKPLEMCFGGGGNDDDLLWHTDLKPHASGNYSIAVVQANSSLEDQAQVFTSPSETFVGVYDGHGGPEVSRFITNHLFSFLRKFATEEGGLSEEVIKKAFEATEEEFLRLVKQSWIARPQIASVGSCCLLGAISNDVLYVANLGDSRAVLGRKALEGEVNCGPVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCTRGVWRIKGIIQVSRSIGDVYLKKPEFDTNPLFQQFVCPLYLKRPVMTAEPSILTRKLKADDLFLIFASDGLWEHLTDEAAVEIIFRSPRIGIAKRLVRAALEEVAKKRDMRYEDIRKIEKGLRRHFHDDITVIVLYLDHSQESLSGRSRHQGVYDCINTPIDIFSLGAAEADL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2547 375 SUPERFAMILY PP2C-like 40 341 IPR036457 -
Ssu2g2547 375 PANTHER ALPHABET, ISOFORM E-RELATED 5 374 - -
Ssu2g2547 375 SMART PP2C_4 28 337 IPR001932 -
Ssu2g2547 375 ProSiteProfiles PPM-type phosphatase domain profile. 35 339 IPR001932 -
Ssu2g2547 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Ssu2g2547 375 CDD PP2Cc 42 339 IPR001932 -
Ssu2g2547 375 Gene3D - 25 347 IPR036457 -
Ssu2g2547 375 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 5 374 - -
Ssu2g2547 375 Pfam Protein phosphatase 2C 56 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2547 Ssu-Chr2 84609689 84615853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2547 17 345 PP2C-type Phosphatase Gene Family AT3G51370 54.599 3.20e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2547 - K01102 gmx:100802394 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2547 2 84609689 84615853 Ssu7g0496 7 9234217 9236688 PCT