Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2540 ATGGAGACGTTTAACAAACCTATTGTTGCAACTCTTTTTATTCTGTTTCTGGTCCTCTGCGACGTATCTCTGGCAACAGCGGAGAAGACAGAGAACCAGAAGAGTACTTACATAGTCCACGTGGCAAAATCCGAAATGCCAGCAAGCTTCGAGCACCATTCAGTCTGGTACAAATCACTTCTGAAATCAGTATCTAACTCAGCAAGAATGCTCTACACCTATGACAACGCGATTCATGGATTCTCAGCAAAATTAACACCCGAAGAAGCACAGTTACTAAAGAGCCGAACCGGGATTCTAAAGGTGCTACCAGAGAAAATATACAAGCCACTCACAACTCGAACACCACACTTCCTTGGGCTTGATAAAATCGCTGACATGGCCCCTGAGTCAAACGGAGGAAGTGACGTCATTGTCGGACTCCTCGACACTGGCGTTTGGCCCGAAAGCAAGAGCTTCGACGATACCGGACTGGGACCCATCCCCAGCACATGGAAAGGAAAATGTGAATCAGGTGTCGATTTCCCGAACTGCAATAAGAAATTGATAGGAGCAAGGTCCTTCGGAAAAGGCTACGAGGCCTTGATGGGTCCCATTAACGAAGAGAAGCAGTACAAATCGCCGCGAGACGATGACGGCCACGGGACCCACACTGCAAGCACAGCCGCAGGGTCTGCAGTGGAAGGCGCGAGCCTATTCGGCTACGCTTCCGGTACGGCGCGTGGGATGGCCTCACGCGCCAGAGTCGCTGTCTACAAGGTTTGCTGGGGAGATTCTTGTGCTGTTTCTGATATAGTGGCAGCAATGGACTCGGCCATCTCTGACAACGTCAATGTCCTTTCATTATCGCTTGGAGGTGCAACAGAGAGTTACGATTTAGATGACGTTTCAATTGGAGCCTTTGCTGCAATGGAGAAAGGGATTGTAGTTTCTTGCTCTGCAGGCAACGATGGTCCTGAGCCCTCTTCTCTTAGCTCCAATGTAGCACCTTGGTTGATCACCGTGGGAGCTGGCACACTCGATCGTGACTTCCCGGCGTACGTTAGCCTCGGGAATGGACAAAACTATTCTGGAGTGTCAATTTATAGTGGCAATTCTTTGCCCAGTACTCTAGTGCCATTCATATATGCAGGGGACGGAAGCGTAGAAAAGCTGTGTTCGATGGACAGCTTGAATCCGAAAAAGGTTAAAGGGAAAATTGTGTTGTGTGAACGTGGATATAATCCTTTGTTAGAGAAAGGACTCGCGGTGAAATCCGCCGGCGGTGTGGGCATGGTGTTGGCGAACAGGGAATTCGACGGAGAGGAAGAAGTTCTAGTGCAGCCCCATTTTTTGCCAACAACTGTGGTGGGTTTTAAAGCCGTGAAAGCCATCAAGAAGTACCTGTCATCTGATCCAAAACCGACGGCTACGATTGTGTCTCAGGGAACGAAGGTTGGAATTGAGCCGTCGCCGGTTGTTGCGGCGTTTAGCTCGCGGGGCCCAAATCAAATCACACCAGAGATATTGAAGCCTGATTTCATTGCGCCAGGTGTCAACGTTTTAGCGGCATGGACAAGGCATAAGGGTCCCACCGACGCCGACGGAGATGATAGGCGCGTGGACTTCAACATCGTCTCAGGCACATCCATGTCATGCCCTCATGTGAGTGGTATAGCGGCCGTGATCAAGTCCGTTCATCCAAATTGGAGCCCAGCCGCAATTCGATCCGCACTAATGACCACGGCTTATTCGACTTACACCAACGGTCAGAAATTGCTAGATAGTGCCACGAACGAATCGTCGACACCGTTTGATATCGGCGCTGGACACGTGAACCCGGTTGCTGCGCTTAATCCTGGACTTGTCTATGATTTGACACCCGATGATTATCTCAACTTCCTTTGTGCTTTAAACTACACACCCGATAGGATCGAAACCGTGGCGAGGAGAAAGTACAAGTGCGATGCACACAAACACTACAGTGTAACAGACTTAAATTACCCTTCATTTGGTGTGGTGTTTAAACCAGCAGAGGGTGGGAACGATGCAATGGTTGTTAAACACACGCGGACTCTTACTAATGTGGGGGCAGCAGGAACGTACAAGGTATCAGTTACGTTGGATATTCCATCTGTCAAGATCACAGTTGAGCCAGACGTGTTGAGCTTCGACCAAAATGGGAATAGGTCATATACAGTGACGTTTACGGCATCAAGTTCACCACCGTCGAGTAAATTTGGTTTTGGACGTTTAGCATGGTCAAATGGAAAGAACGTTGTTGGAAGTCCTATCGCAATTATTTGGGACACCGTACTGGGAGTGACTGAAAACTCCAAGAAGGTTGACTGA 2331 0.4908 METFNKPIVATLFILFLVLCDVSLATAEKTENQKSTYIVHVAKSEMPASFEHHSVWYKSLLKSVSNSARMLYTYDNAIHGFSAKLTPEEAQLLKSRTGILKVLPEKIYKPLTTRTPHFLGLDKIADMAPESNGGSDVIVGLLDTGVWPESKSFDDTGLGPIPSTWKGKCESGVDFPNCNKKLIGARSFGKGYEALMGPINEEKQYKSPRDDDGHGTHTASTAAGSAVEGASLFGYASGTARGMASRARVAVYKVCWGDSCAVSDIVAAMDSAISDNVNVLSLSLGGATESYDLDDVSIGAFAAMEKGIVVSCSAGNDGPEPSSLSSNVAPWLITVGAGTLDRDFPAYVSLGNGQNYSGVSIYSGNSLPSTLVPFIYAGDGSVEKLCSMDSLNPKKVKGKIVLCERGYNPLLEKGLAVKSAGGVGMVLANREFDGEEEVLVQPHFLPTTVVGFKAVKAIKKYLSSDPKPTATIVSQGTKVGIEPSPVVAAFSSRGPNQITPEILKPDFIAPGVNVLAAWTRHKGPTDADGDDRRVDFNIVSGTSMSCPHVSGIAAVIKSVHPNWSPAAIRSALMTTAYSTYTNGQKLLDSATNESSTPFDIGAGHVNPVAALNPGLVYDLTPDDYLNFLCALNYTPDRIETVARRKYKCDAHKHYSVTDLNYPSFGVVFKPAEGGNDAMVVKHTRTLTNVGAAGTYKVSVTLDIPSVKITVEPDVLSFDQNGNRSYTVTFTASSSPPSSKFGFGRLAWSNGKNVVGSPIAIIWDTVLGVTENSKKVD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2540 776 CDD Peptidases_S8_3 108 577 IPR034197 -
Ssu2g2540 776 Pfam Peptidase inhibitor I9 36 109 IPR010259 -
Ssu2g2540 776 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Ssu2g2540 776 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Ssu2g2540 776 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Ssu2g2540 776 Gene3D - 628 761 - -
Ssu2g2540 776 ProSiteProfiles Serine proteases, subtilase domain profile. 118 611 - -
Ssu2g2540 776 CDD PA_subtilisin_like 347 472 - -
Ssu2g2540 776 Pfam PA domain 376 458 IPR003137 -
Ssu2g2540 776 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 25 763 - -
Ssu2g2540 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 110 IPR037045 -
Ssu2g2540 776 Gene3D Peptidase S8/S53 domain 136 624 IPR036852 GO:0004252|GO:0006508
Ssu2g2540 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 763 IPR045051 -
Ssu2g2540 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Ssu2g2540 776 SUPERFAMILY PA domain 369 435 IPR046450 -
Ssu2g2540 776 Pfam Subtilase family 134 584 IPR000209 GO:0006508|GO:0008236
Ssu2g2540 776 Pfam Fibronectin type-III domain 658 760 IPR041469 -
Ssu2g2540 776 Gene3D - 341 480 - -
Ssu2g2540 776 SUPERFAMILY Subtilisin-like 111 615 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2540 Ssu-Chr2 84492953 84495283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2540 15 762 Subtilisin-like Serine Gene Family AT5G67360 62.914 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2540 - - gmx:100801866 1159.44